Center for Quantitative Biology, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China.
Department of Molecular Biology, Princeton University, Princeton, New Jersey 08544, United States.
J Phys Chem Lett. 2021 May 6;12(17):4286-4291. doi: 10.1021/acs.jpclett.1c00681. Epub 2021 Apr 28.
Ryanodine receptors (RyRs) are ion channels responsible for the fast release of Ca from the sarco/endoplasmic reticulum to the cytosol and show a selectivity of Ca over monovalent cations. By utilizing a recently developed multisite Ca model in molecular dynamic simulations, we show that multiple cations accumulate in the upper selectivity filter of RyRs, and the small size and high valence of Ca make it preferable to K in competition for space in this confined region of negative electrostatic potential. The presence of Ca in the upper selectivity filter significantly increases the energy barrier of K permeation, while the presence of K has little impact on the Ca permeation. Our results provide the atomistic details of the charge/space competition mechanism for the ion selectivity of RyRs, which ensures the robustness of their Ca release function. The mechanism could be utilized in protein- and nanoengineering for valence selectivity of ion species.
兰尼碱受体(RyRs)是一种离子通道,负责将 Ca 从肌浆/内质网快速释放到细胞质中,对 Ca 具有选择性,而对单价阳离子则没有选择性。通过在分子动力学模拟中利用最近开发的多位点 Ca 模型,我们表明多个阳离子在 RyRs 的上选择性过滤器中积累,而 Ca 的小尺寸和高电荷使其在这个负静电势的受限区域中比 K 更有利于空间竞争。上选择性过滤器中 Ca 的存在显著增加了 K 渗透的能量屏障,而 K 的存在对 Ca 渗透几乎没有影响。我们的结果提供了 RyRs 离子选择性的电荷/空间竞争机制的原子细节,这确保了它们 Ca 释放功能的稳健性。该机制可用于蛋白质和纳米工程中的离子种类的价选择性。