LISAH, Univ. Montpellier, INRAE, IRD, Montpellier SupAgro, Montpellier, France.
HSM, CNRS, IRD, Univ. Montpellier, Montpellier, France.
Epidemiol Infect. 2021 Apr 29;149:e138. doi: 10.1017/S0950268821001011.
Susceptible S-Infected I-Recovered R-Death D (SIRD) compartmental models are often used for modelling of infectious diseases. On the basis of the analogy between SIRD and compartmental models in hydrology, this study makes mathematical formulations developed in hydrology available for modelling in epidemiology. We adapt the Hayami model solution of the diffusive wave equation generally used in hydrological modelling to compartmental I-R-D models in epidemiology by simulating the relationships between the number of infectious I(t), the number of recoveries R(t) and the number of deaths D(t). The Hayami model is easy-to-use, robust and parsimonious. We compare the empirical one-parameter exponential model usually used in SIRD models to the two-parameter Hayami model. Applications were implemented on the recent Covid-19 pandemic. The application on data from 24 countries shows that both models give comparable performances for modelling the I-D relationship. However, for modelling the I-R relationship and the active cases, the exponential model gives fair performances whereas the Hayami model substantially improves the model performances. The Hayami model also presents the advantage that its parameters can be easily estimated from the analysis of the data distributions of I(t), R(t) and D(t). The Hayami model is parsimonious with only two parameters which are useful to compare the temporal evolution of recoveries and deaths in different countries based on different contamination rates and recoveries strategies. This study highlights the interest of knowledge transfer between different scientific disciplines in order to model different processes.
易感者-感染者-恢复者-死亡者(SIRD) compartmental 模型常用于传染病建模。基于 SIRD 与水文学中 compartmental 模型之间的类比,本研究将水文学中开发的数学公式应用于流行病学中的建模。我们通过模拟传染病中的感染人数 I(t)、恢复人数 R(t)和死亡人数 D(t)之间的关系,将 Hayami 模型对扩散波方程的解应用于流行病学中的 compartmental I-R-D 模型。Hayami 模型易于使用、稳健且简洁。我们将通常用于 SIRD 模型的经验单参数指数模型与双参数 Hayami 模型进行了比较。我们在最近的新冠疫情中进行了应用。对 24 个国家的数据的应用表明,这两个模型在建模 I-D 关系方面表现相当。然而,对于建模 I-R 关系和活跃病例,指数模型表现良好,而 Hayami 模型则显著提高了模型性能。Hayami 模型的另一个优点是其参数可以通过分析 I(t)、R(t)和 D(t)的数据分析轻松估计。Hayami 模型简洁,只有两个参数,可用于比较不同污染率和恢复策略下不同国家的恢复和死亡的时间演变。本研究强调了在不同科学领域之间进行知识转移以建模不同过程的兴趣。