Key Laboratory of Pesticide and Chemical Biology, Ministry of Education, College of Chemistry, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan, 430079, China; International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, China.
Key Laboratory of Pesticide and Chemical Biology, Ministry of Education, College of Chemistry, International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan, 430079, China; International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University, Wuhan 430079, China; State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, China.
Trends Pharmacol Sci. 2021 Jul;42(7):551-565. doi: 10.1016/j.tips.2021.04.001. Epub 2021 May 3.
Protein kinases (PKs) are important drug targets, but kinases selectivity poses a challenge to protein kinase inhibitors (PKIs) design. Fragment-based drug discovery (FBDD) has achieved great success in the discovery of highly specific PKIs. It makes full use of kinase-fragment interaction in target kinase subpockets to obtain promising selectivity. However, it's difficult to understand the complicated kinase-fragment interaction space, and systemic discussion of these interactions is still lacking. Herein, we introduce the advantages of the FBDD strategy in PKIs design. Key features of the selectivity of kinase-fragment interactions are summarized and analyzed. Some promising PKIs are introduced as case studies to help understand the fragment-to-lead (F2L) optimization process. Novel strategies and technologies for FBDD in PKIs discovery are also outlooked.
蛋白激酶(PKs)是重要的药物靶点,但激酶选择性对蛋白激酶抑制剂(PKIs)的设计提出了挑战。基于片段的药物发现(FBDD)在发现高度特异性的 PKIs 方面取得了巨大成功。它充分利用了靶激酶亚口袋中激酶-片段相互作用,获得了有前途的选择性。然而,理解复杂的激酶-片段相互作用空间具有一定难度,对这些相互作用的系统讨论仍然缺乏。本文介绍了 FBDD 策略在 PKIs 设计中的优势。总结和分析了激酶-片段相互作用选择性的关键特征。并引入了一些有前途的 PKIs 作为案例研究,以帮助理解从片段到先导物(F2L)的优化过程。展望了 PKIs 发现中 FBDD 的新策略和新技术。