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消除障碍:氘代提供了一种提高 Cu 标记灵敏度和可及距离的途径。

dHis-troying Barriers: Deuteration Provides a Pathway to Increase Sensitivity and Accessible Distances for Cu Labels.

机构信息

Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.

出版信息

J Phys Chem Lett. 2021 May 20;12(19):4681-4685. doi: 10.1021/acs.jpclett.1c01002. Epub 2021 May 12.

Abstract

Recently, site-directed Cu labeling has emerged as an incisive biophysical tool to directly report on distance constraints that pertain to the structure, conformational transitions, and dynamics of proteins and nucleic acids. However, short phase memory times inherent to the Cu labels limit measurable distances to 4-5 nm. In this work we systematically examine different methods to dampen electron-nuclear and electron-electron coupled interactions to decrease rapid relaxation. We show that using Cu spin concentrations up to ca. 800 μM has an invariant effect on relaxation and that increasing the cryoprotectant concentration reduces contributions of solvent protons to relaxation. On the other hand, the deuteration of protein and solvent dramatically increases the duration of the dipolar modulated signal by over 6-fold to 32 μs. Based on this increase in signal longevity, distances up to 9 nm and beyond can potentially be measured with Cu labels.

摘要

最近,定点 Cu 标记已成为一种锐利的生物物理工具,可以直接报告与蛋白质和核酸的结构、构象转变和动力学相关的距离约束。然而,Cu 标记固有的短相位记忆时间限制了可测量的距离至 4-5nm。在这项工作中,我们系统地研究了不同的方法来抑制电子-核和电子-电子耦合相互作用,以减少快速弛豫。我们表明,使用高达约 800μM 的 Cu 自旋浓度对弛豫具有不变的影响,并且增加冷冻保护剂浓度会降低溶剂质子对弛豫的贡献。另一方面,蛋白质和溶剂的氘化使偶极调制信号的持续时间增加了 6 倍以上,达到 32μs。基于信号寿命的这种增加,可以使用 Cu 标记测量长达 9nm 及以上的距离。

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