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小麦(.L)中的糖转运蛋白家族:全基因组鉴定、分类及幼苗胁迫期间的表达谱分析

The Sugar Transporter family in wheat (. L): genome-wide identification, classification, and expression profiling during stress in seedlings.

作者信息

Liu Hongzhan, Li Chaoqiong, Qiao Lin, Hu Lizong, Wang Xueqin, Wang Junsheng, Ruan Xianle, Yang Guangyu, Yin Guihong, Wang Chunping, Sun Zhongke, Ma Keshi, Li Lili

机构信息

Zhoukou Academy of Agricultural Sciences, Zhoukou, Henan, China.

College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, Henan, China.

出版信息

PeerJ. 2021 May 4;9:e11371. doi: 10.7717/peerj.11371. eCollection 2021.

Abstract

The sugar transporter protein (STP) plays a crucial role in regulating plant growth and stress tolerance. We performed genome-wide identification and expression analysis of the STP gene family to investigate the STPSs' potential roles in the growth of wheat seedlings under stress. Here, a total of 81 TaSTP genes containing the Sugar_tr conserved motif were identified within the wheat genome. Bioinformatic studies including phylogenetic tree, chromosome position, and tandem repeat were performed to analyze the identified genes. The 81 TaSTP genes can be classified into five main groups according to their structural and phylogenetic features, with several subgroups, which were located separately on chromosomes A, B, and D. Moreover, six gene clusters were formed with more than three genes each. The results of three comparative syntenic maps of wheat associated with three representative species suggested that STP genes have strong relationships in monocots. qRT-PCR analysis confirmed that most TaSTP genes displayed different expression profiles after seedlings were subjected to six days of different stress (10% PEG6000, 150 mM NaCl, and their combination, respectively), suggesting that these genes may be involved in regulating plant growth and stress tolerance. In conclusion, 81 TaSTP genes were identified and their expressions changed under stress, indicating TaSTP's potential roles in wheat growth monosaccharide distribution is regulated.

摘要

糖转运蛋白(STP)在调节植物生长和胁迫耐受性方面起着至关重要的作用。我们对STP基因家族进行了全基因组鉴定和表达分析,以研究STP在胁迫下小麦幼苗生长中的潜在作用。在此,在小麦基因组中总共鉴定出81个含有Sugar_tr保守基序的TaSTP基因。进行了包括系统发育树、染色体位置和串联重复在内的生物信息学研究,以分析鉴定出的基因。根据其结构和系统发育特征,81个TaSTP基因可分为五个主要组,并带有几个亚组,它们分别位于A、B和D染色体上。此外,形成了六个基因簇,每个基因簇包含三个以上的基因。与三个代表性物种相关的小麦三个比较共线性图谱的结果表明,STP基因在单子叶植物中具有很强的关系。qRT-PCR分析证实,在幼苗分别经受六天不同胁迫(10% PEG6000、150 mM NaCl及其组合)后,大多数TaSTP基因表现出不同的表达谱,这表明这些基因可能参与调节植物生长和胁迫耐受性。总之,鉴定出8个TaSTP基因,其表达在胁迫下发生变化,表明TaSTP在小麦生长单糖分布调节中的潜在作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31e6/8103919/c039d41126fb/peerj-09-11371-g001.jpg

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