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环状 RNA、长链非编码 RNA、微小 RNA 和信使 RNA 网络综合研究介导睾丸热暴露的影响。

Integrated study of circRNA, lncRNA, miRNA, and mRNA networks in mediating the effects of testicular heat exposure.

机构信息

School of Life Science, Bengbu Medical College, Bengbu, Anhui, China.

NHC Key Laboratory of Male Reproduction and Genetics (Family Planning Research Institute of Guangdong Province), Guangzhou, Guangdong, China.

出版信息

Cell Tissue Res. 2021 Oct;386(1):127-143. doi: 10.1007/s00441-021-03474-z. Epub 2021 May 20.

Abstract

The World Health Organization has recognized that testicular function is temperature dependent. Testicular heat exposure caused by occupational factors, lifestyle, and clinical diseases can lead to different degrees of reproductive problems. The aim of this study was to reveal the transcriptional regulatory network and its potential crucial roles in mediating the effects of testicular heat exposure. Testicular tissue was collected from a group of mice subjected to scrotal heat exposure as well as a control group. RNA was isolated from both groups and used for high-throughput sequencing. Using differential transcriptome expression analysis, 172 circRNAs, 279 miRNAs, 465 lncRNAs, and 2721 mRNAs were identified as significantly differentially expressed in mouse testicular tissue after heat exposure compared with the control group. Through Gene Ontology (GO) term and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses, differentially expressed lncRNAs and mRNAs were found to have potentially important functions in meiotic cell cycle (GO:0051321), cytoplasm (GO:0005737), membrane raft (GO:0045121), MAPK signaling (mmu04010), purine metabolism (mmu00230), and homologous recombination (mmu03440). Some of the most upregulated and downregulated lncRNAs and circRNAs were predicted to be associated with numerous miRNAs and mRNAs through competing endogenous RNA regulatory network analysis, which were validated with molecular biology experiments. This research provides high-throughput sequencing data of a testicular heat exposure model and lays the foundation for further study on circRNAs, miRNAs, and lncRNAs that are involved in male reproductive diseases related to elevated testicular temperature.

摘要

世界卫生组织已经认识到睾丸功能是依赖于温度的。职业因素、生活方式和临床疾病引起的睾丸热暴露会导致不同程度的生殖问题。本研究旨在揭示转录调控网络及其在介导睾丸热暴露效应中的潜在关键作用。从一组接受阴囊热暴露的小鼠和对照组的睾丸组织中收集组织。从两组中分离 RNA,并用于高通量测序。通过差异转录组表达分析,与对照组相比,在热暴露后,172 个 circRNA、279 个 miRNA、465 个 lncRNA 和 2721 个 mRNA 在小鼠睾丸组织中被鉴定为显著差异表达。通过基因本体论(GO)术语和京都基因与基因组百科全书(KEGG)途径分析,差异表达的 lncRNA 和 mRNA 被发现可能在减数分裂细胞周期(GO:0051321)、细胞质(GO:0005737)、膜筏(GO:0045121)、MAPK 信号(mmu04010)、嘌呤代谢(mmu00230)和同源重组(mmu03440)中具有潜在的重要功能。通过竞争内源性 RNA 调控网络分析,预测一些上调和下调的 lncRNA 和 circRNA 与许多 miRNA 和 mRNA 相关,并通过分子生物学实验进行验证。这项研究提供了睾丸热暴露模型的高通量测序数据,为进一步研究与睾丸温度升高相关的男性生殖疾病中涉及的 circRNA、miRNA 和 lncRNA 奠定了基础。

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