Lou Weiyang, Wang Wenlong, Chen Jing, Wang Shuqian, Huang Yuan
Department of Breast Surgery, The First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310003 Zhejiang, China.
Intensive Care Unit, Hangzhou Hospital of Traditional Chinese Medicine, Hangzhou, China.
Mol Ther Nucleic Acids. 2021 Apr 1;24:845-855. doi: 10.1016/j.omtn.2021.03.014. eCollection 2021 Jun 4.
Hepatocellular carcinoma (HCC) is notorious for its poor prognosis. Increasing evidence has demonstrated that semaphorin 3F (SEMA3F) plays key roles in initiation and progression of several types of human cancer. However, the specific role and mechanism of SEMA3F in HCC remains not fully determined. In this study, we first performed pan-cancer analysis for SEMA3F's expression and prognosis using The Cancer Genome Atlas (TCGA) and The Genotype-Tissue Expression (GTEx) data and found that SEMA3F might be a potential oncogene in HCC. Subsequently, noncoding RNAs (ncRNAs) contributing to SEMA3F overexpression were identified by a combination of a series of analyses, including expression analysis, correlation analysis, and survival analysis. Finally, the TMPO-AS1/SNHG16-let-7c-5p axis was identified as the most potential upstream ncRNA-related pathway of SEMA3F in HCC. Moreover, SEMA3F level was significantly positively associated with tumor immune cell infiltration, biomarkers of immune cells, and immune checkpoint expression. Collectively, our findings elucidated that ncRNAs-mediated upregulation of SEMA3F correlated with poor prognosis and tumor immune infiltration in HCC.
肝细胞癌(HCC)因其预后较差而声名狼藉。越来越多的证据表明,信号素3F(SEMA3F)在几种人类癌症的发生和发展中起关键作用。然而,SEMA3F在HCC中的具体作用和机制仍未完全确定。在本研究中,我们首先使用癌症基因组图谱(TCGA)和基因型-组织表达(GTEx)数据对SEMA3F的表达和预后进行泛癌分析,发现SEMA3F可能是HCC中的一种潜在癌基因。随后,通过一系列分析(包括表达分析、相关性分析和生存分析)相结合的方法,鉴定出导致SEMA3F过表达的非编码RNA(ncRNA)。最后,TMPO-AS1/SNHG16-let-7c-5p轴被确定为HCC中SEMA3F最具潜力的上游ncRNA相关通路。此外,SEMA3F水平与肿瘤免疫细胞浸润、免疫细胞生物标志物以及免疫检查点表达显著正相关。总的来说,我们的研究结果表明,ncRNA介导的SEMA3F上调与HCC的不良预后和肿瘤免疫浸润相关。