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SAPHO 综合征患者粪便相关微生物组中非优势物种丰度的改变。

Abundance alteration of nondominant species in fecal-associated microbiome of patients with SAPHO syndrome.

机构信息

School of Life Sciences, Beijing University of Chinese Medicine, Beijing, 100029, China.

Oncology Department, Dongfang Hospital, Beijing University of Chinese Medicine, Beijing, 100078, China.

出版信息

BMC Microbiol. 2021 May 30;21(1):161. doi: 10.1186/s12866-021-02221-2.

DOI:10.1186/s12866-021-02221-2
PMID:34053449
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8166064/
Abstract

BACKGROUND

SAPHO syndrome is a group of symptoms consisting of synovitis, acne, pustulosis, hyperostosis and osteosis. There is no specific laboratory index assist in the diagnosis of SAPHO because of its highly heterogeneous clinical manifestations. Pathogenic microorganisms had been identified in biopsies of some SAPHO cases and particular gene mutations were also linked to the occurrence of SAPHO. It is largely unknown whether intestinal microbiome plays a role in pathogenesis of SAPHO. To explore the intestinal microbiome structure of SAPHO syndrome, fecal samples from 17 SAPHO patients and 14 healthy controls (HC) were collected for 16S rDNA sequencing.

RESULTS

Our results showed that there was no significant difference in alpha indexes and beta diversity between SAPHO and HC samples, while there were 14 operational taxonomic units (OTUs) in the Wilcoxon rank-sum test and 42 OTUs in the MetagenomeSeq analysis showed significant difference in distribution between the SAPHO and HC groups, 3 of which in Firmicutes were also observed in the random forest analysis and used to construct a receiver operating characteristic curve to evaluate the diagnostic value, the area under the curve was 0.86.

CONCLUSION

Fecal-associated microbiome in the SAPHO samples was characterized by the alteration in abundance of some nondominant species, and the 3 selected OTUs in Firmicutes could serve as candidate biomarkers for SAPHO syndrome diagnosis.

摘要

背景

SAPHO 综合征是一组由滑膜炎、痤疮、脓疱病、骨肥厚和骨炎组成的症状。由于其临床表现高度异质性,SAPHO 综合征的诊断没有特异性的实验室指标。在一些 SAPHO 病例的活检中已经鉴定出了致病微生物,特定的基因突变也与 SAPHO 的发生有关。肠道微生物组在 SAPHO 发病机制中是否起作用尚不清楚。为了探讨 SAPHO 综合征的肠道微生物组结构,收集了 17 例 SAPHO 患者和 14 例健康对照(HC)的粪便样本进行 16S rDNA 测序。

结果

我们的结果表明,SAPHO 和 HC 样本之间的 alpha 指数和 beta 多样性没有显著差异,而在 Wilcoxon 秩和检验中有 14 个操作分类单元(OTU),在 MetagenomeSeq 分析中有 42 个 OTU 在 SAPHO 和 HC 组之间的分布有显著差异,其中 3 个在厚壁菌门中也在随机森林分析中观察到,并用于构建接受者操作特征曲线来评估诊断价值,曲线下面积为 0.86。

结论

SAPHO 样本中的粪便相关微生物组的特征是一些非优势物种丰度的改变,厚壁菌门中的 3 个选定的 OTU 可作为 SAPHO 综合征诊断的候选生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/76bb0835c44a/12866_2021_2221_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/15ff4bb0cfb1/12866_2021_2221_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/b082a8de85e0/12866_2021_2221_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/442747fdb7d4/12866_2021_2221_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/21487ecdd461/12866_2021_2221_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/dbdb884651f3/12866_2021_2221_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/76bb0835c44a/12866_2021_2221_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/15ff4bb0cfb1/12866_2021_2221_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/b082a8de85e0/12866_2021_2221_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/442747fdb7d4/12866_2021_2221_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/21487ecdd461/12866_2021_2221_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/dbdb884651f3/12866_2021_2221_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d57e/8166064/76bb0835c44a/12866_2021_2221_Fig6_HTML.jpg

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