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使用具有成本效益的微流控技术分离和富集钠动力细菌。

Separation and enrichment of sodium-motile bacteria using cost-effective microfluidics.

作者信息

Gurung Jyoti P, Navvab Kashani Moein, Agarwal Sanaz, Peralta Gonzalo, Gel Murat, Baker Matthew A B

机构信息

School of Biotechnology and Biomolecular Science, UNSW Sydney, Sydney, NSW 2052, Australia.

出版信息

Biomicrofluidics. 2021 May 27;15(3):034108. doi: 10.1063/5.0046941. eCollection 2021 May.

Abstract

Many motile bacteria are propelled by the rotation of flagellar filaments. This rotation is driven by a membrane protein known as the stator-complex, which drives the rotor of the bacterial flagellar motor. Torque generation is powered in most cases by proton transit through membrane protein complexes known as stators, with the next most common ionic power source being sodium. Sodium-powered stators can be studied through the use of synthetic chimeric stators that combine parts of sodium- and proton-powered stator proteins. The most well studied example is the use of the sodium-powered PomA-PotB chimeric stator unit in the naturally proton-powered Here we designed a fluidics system at low cost for rapid prototyping to separate motile and non-motile populations of bacteria while varying the ionic composition of the media and thus the sodium-motive force available to drive this chimeric flagellar motor. We measured separation efficiencies at varying ionic concentrations and confirmed using fluorescence that our device delivered eightfold enrichment of the motile proportion of a mixed population. Furthermore, our results showed that we could select bacteria from reservoirs where sodium was not initially present. Overall, this technique can be used to implement the selection of highly motile fractions from mixed liquid cultures, with applications in directed evolution to investigate the adaptation of motility in bacterial ecosystems.

摘要

许多运动性细菌通过鞭毛丝的旋转来推进。这种旋转由一种称为定子复合体的膜蛋白驱动,该蛋白驱动细菌鞭毛马达的转子。在大多数情况下,扭矩的产生是由质子通过称为定子的膜蛋白复合体转运来提供动力的,其次最常见的离子动力源是钠。可以通过使用合成嵌合定子来研究钠动力定子,这些嵌合定子结合了钠动力和质子动力定子蛋白的部分。研究得最充分的例子是在天然质子动力的 中使用钠动力的PomA-PotB嵌合定子单元。在这里,我们设计了一种低成本的流体系统用于快速原型制作,以分离运动性和非运动性细菌群体,同时改变培养基的离子组成,从而改变驱动这种嵌合鞭毛马达的钠动力。我们测量了不同离子浓度下的分离效率,并通过荧光确认我们的装置使混合群体中运动部分的富集度提高了八倍。此外,我们的结果表明,我们可以从最初不存在钠的储库中选择细菌。总体而言,这项技术可用于从混合液体培养物中筛选高运动性部分,在定向进化中具有应用价值,以研究细菌生态系统中运动性的适应性。

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