……的完整叶绿体基因组
The complete chloroplast genome of .
作者信息
Liu Yun-Ke, Liu Wei, Xiao Qian-Gang, Zeng Zhen, Zhuang Li, Zhang Ting-Hao, Zhang Jun, Huang Qian-Ying, Wang Bao-Xin
机构信息
Chengdu Academy of Agricultural and Forestry Sciences, Chengdu, Sichuan, China.
出版信息
Mitochondrial DNA B Resour. 2021 Jun 3;6(7):1824-1825. doi: 10.1080/23802359.2021.1930599.
is of the unique edible bamboo specie of high quality in China. We studied the complete chloroplast(cp) genome of in this study. The cp genome of (GenBank accession: MW186792) was 138,911 bp in length, including a large single-copy (LSC) region of 82,498 bp, a small single-copy (SSC) region of 12,743 bp and a pair of inverted repeated (IR) regions of 21,835 bp. The genome contained 133 genes, including 86 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Based on 39 cp genomes, we used the phylogenetic analysis to build phylogenetic tree, indicating that is closely related to . Also, the phylogenetic relationship of lineages might be (Hsuehochloa + (((Shibataea clade + Arundinaria clade) + Indocalamus wilsonii) + ((Bergbambos + Indocalamus) + (((African alpine bamboos + Gaoligongshania) + (Chimonocalamus + Kuruna))+(Thamnocalamus + Phyllostachys clade))))). It could be devoted to phylogenetic analysis of Arundinarieae.
是中国特有的优质食用竹种。在本研究中，我们对其完整叶绿体（cp）基因组进行了研究。（GenBank登录号：MW186792）的cp基因组长度为138,911 bp，包括一个82,498 bp的大单拷贝（LSC）区域、一个12,743 bp的小单拷贝（SSC）区域和一对21,835 bp的反向重复（IR）区域。该基因组包含133个基因，包括86个蛋白质编码基因、39个tRNA基因和8个rRNA基因。基于39个cp基因组，我们进行系统发育分析构建系统发育树，表明与密切相关。此外，各谱系的系统发育关系可能是（玉山竹属+（（（刚竹亚科分支+青篱竹亚科分支）+鄂西箬竹）+（（伯格竹属+箬竹属）+（（非洲高山竹类+高黎贡山竹属）+（寒竹属+库鲁纳竹属））+（筱竹属+刚竹属分支））））。它可用于青篱竹族的系统发育分析。
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