eScience Institute, University of Washington, Seattle, Washington, United States of America.
Graduate School of Education and Division of Developmental and Behavioral Pediatrics, Stanford University, Stanford, California, United States of America.
PLoS Comput Biol. 2021 Jun 28;17(6):e1009136. doi: 10.1371/journal.pcbi.1009136. eCollection 2021 Jun.
The white matter contains long-range connections between different brain regions and the organization of these connections holds important implications for brain function in health and disease. Tractometry uses diffusion-weighted magnetic resonance imaging (dMRI) to quantify tissue properties along the trajectories of these connections. Statistical inference from tractometry usually either averages these quantities along the length of each fiber bundle or computes regression models separately for each point along every one of the bundles. These approaches are limited in their sensitivity, in the former case, or in their statistical power, in the latter. We developed a method based on the sparse group lasso (SGL) that takes into account tissue properties along all of the bundles and selects informative features by enforcing both global and bundle-level sparsity. We demonstrate the performance of the method in two settings: i) in a classification setting, patients with amyotrophic lateral sclerosis (ALS) are accurately distinguished from matched controls. Furthermore, SGL identifies the corticospinal tract as important for this classification, correctly finding the parts of the white matter known to be affected by the disease. ii) In a regression setting, SGL accurately predicts "brain age." In this case, the weights are distributed throughout the white matter indicating that many different regions of the white matter change over the lifespan. Thus, SGL leverages the multivariate relationships between diffusion properties in multiple bundles to make accurate phenotypic predictions while simultaneously discovering the most relevant features of the white matter.
白质包含不同脑区之间的长程连接,这些连接的组织对于健康和疾病中的大脑功能具有重要意义。束流测量学使用扩散加权磁共振成像(dMRI)来量化这些连接轨迹上的组织特性。束流测量学的统计推断通常要么沿着每个纤维束的长度对这些数量进行平均,要么分别为每个纤维束上的每个点计算回归模型。这些方法在灵敏度方面存在局限性,在前一种情况下,或者在统计能力方面存在局限性,在后一种情况下。我们开发了一种基于稀疏组套索(SGL)的方法,该方法考虑了所有束流的组织特性,并通过强制全局和束流级稀疏性来选择信息丰富的特征。我们在两种情况下展示了该方法的性能:i)在分类设置中,肌萎缩侧索硬化症(ALS)患者可以与匹配的对照组准确区分。此外,SGL 确定皮质脊髓束对于这种分类很重要,正确地找到了已知受疾病影响的白质部分。ii)在回归设置中,SGL 可以准确预测“大脑年龄”。在这种情况下,权重分布在整个白质中,表明白质的许多不同区域在整个生命周期中都会发生变化。因此,SGL 利用了多个束流中扩散特性之间的多元关系来进行准确的表型预测,同时发现白质中最相关的特征。