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谷氨酸在高压环境下优化脱硫弧菌属的酶活性:对普遍存在的硫氧还蛋白系统的影响。

Glutamate optimizes enzymatic activity under high hydrostatic pressure in Desulfovibrio species: effects on the ubiquitous thioredoxin system.

机构信息

Université de Toulon, CNRS, IRD, MIO, Aix Marseille Univ, Marseille, France.

CNRS, LISM, Aix Marseille Univ, Marseille, France.

出版信息

Extremophiles. 2021 Jul;25(4):385-392. doi: 10.1007/s00792-021-01236-x. Epub 2021 Jul 1.

Abstract

In piezophilic microorganisms, enzymes are optimized to perform under high hydrostatic pressure. The two major reported mechanisms responsible for such adaptation in bacterial species are changes in amino acids in the protein structure, favoring their activity and stability under high-pressure conditions, and the possible accumulation of micromolecular co-solutes in the cytoplasm. Recently, the accumulation of glutamate in the cytoplasm of piezophilic Desulfovibrio species has been reported under high-pressure growth conditions. In this study, analysis of the effect of glutamate on the enzymatic activity of the thioredoxin reductase/thioredoxin enzymatic complex of either a piezosensitive or a piezophilic microorganism confirms its role as a protective co-solute. Analysis of the thioredoxin structures suggests an adaptation both to the presence of glutamate and to high hydrostatic pressure in the enzyme from the piezophilic strain. Indeed, the presence of large surface pockets could counterbalance the overall compression that occurs at high hydrostatic pressure to maintain enzymatic activity. A lower isoelectric point and a greater dipolar moment than that of thioredoxin from the piezosensitive strain would allow the protein from the piezophilic strain to compensate for the presence of the charged amino acid glutamate to interact with its partner.

摘要

在嗜压微生物中,酶被优化以在高静压下发挥作用。两种主要报道的细菌适应高压力条件的机制是蛋白质结构中氨基酸的变化,有利于其在高压条件下的活性和稳定性,以及细胞质中可能积累的微量共溶质。最近,在嗜压脱硫弧菌属物种的高压力生长条件下,已报道细胞质中谷氨酸的积累。在这项研究中,分析谷氨酸对敏感型或嗜压微生物的硫氧还蛋白还原酶/硫氧还蛋白酶复合物的酶活性的影响,证实了其作为一种保护共溶质的作用。对硫氧还蛋白结构的分析表明,酶的适应性不仅与谷氨酸的存在有关,而且与嗜压微生物中的高静压有关。事实上,大的表面口袋的存在可以抵消高静压下发生的整体压缩,以维持酶的活性。与敏感型菌株的硫氧还蛋白相比,嗜压型菌株的等电点更低,偶极矩更大,这使得嗜压型菌株的蛋白质能够补偿带电荷的氨基酸谷氨酸的存在,与伴侣相互作用。

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