Department of Computer Science and Engineering, Washington University in Saint Louis, Saint Louis, Missouri, United States of America.
Department of Pathology and Immunology, Washington University School of Medicine, Saint Louis, Missouri, United States of America.
PLoS Comput Biol. 2021 Jul 6;17(7):e1009053. doi: 10.1371/journal.pcbi.1009053. eCollection 2021 Jul.
Drug-drug interactions account for up to 30% of adverse drug reactions. Increasing prevalence of electronic health records (EHRs) offers a unique opportunity to build machine learning algorithms to identify drug-drug interactions that drive adverse events. In this study, we investigated hospitalizations' data to study drug interactions with non-steroidal anti-inflammatory drugs (NSAIDS) that result in drug-induced liver injury (DILI). We propose a logistic regression based machine learning algorithm that unearths several known interactions from an EHR dataset of about 400,000 hospitalization. Our proposed modeling framework is successful in detecting 87.5% of the positive controls, which are defined by drugs known to interact with diclofenac causing an increased risk of DILI, and correctly ranks aggregate risk of DILI for eight commonly prescribed NSAIDs. We found that our modeling framework is particularly successful in inferring associations of drug-drug interactions from relatively small EHR datasets. Furthermore, we have identified a novel and potentially hepatotoxic interaction that might occur during concomitant use of meloxicam and esomeprazole, which are commonly prescribed together to allay NSAID-induced gastrointestinal (GI) bleeding. Empirically, we validate our approach against prior methods for signal detection on EHR datasets, in which our proposed approach outperforms all the compared methods across most metrics, such as area under the receiver operating characteristic curve (AUROC) and area under the precision-recall curve (AUPRC).
药物相互作用导致的不良反应占比高达 30%。电子病历(EHR)的日益普及为构建机器学习算法以识别导致不良事件的药物相互作用提供了独特的机会。在这项研究中,我们调查了住院数据,以研究与非甾体抗炎药(NSAIDs)相互作用导致药物性肝损伤(DILI)的药物相互作用。我们提出了一种基于逻辑回归的机器学习算法,从大约 400,000 次住院的 EHR 数据集中发现了一些已知的相互作用。我们提出的建模框架成功地检测到了 87.5%的阳性对照,这些阳性对照是由已知与双氯芬酸相互作用导致 DILI 风险增加的药物定义的,并正确地对 8 种常用 NSAIDs 的 DILI 总风险进行了排序。我们发现,我们的建模框架特别擅长从相对较小的 EHR 数据集中推断药物相互作用的关联。此外,我们还发现了一种新的、潜在的肝毒性相互作用,可能发生在美洛昔康和埃索美拉唑同时使用时,这两种药物通常同时开处方以缓解 NSAID 引起的胃肠道(GI)出血。通过实证,我们针对 EHR 数据集上的信号检测方法,对我们的方法进行了验证,在大多数指标(如接收者操作特征曲线下的面积(AUROC)和精度-召回曲线下的面积(AUPRC))方面,我们提出的方法都优于所有比较方法。