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危地马拉玛雅人群中与遗传和流行病学因素相关的假性剥脱和白内障综合征。

Pseudoexfoliation and Cataract Syndrome Associated with Genetic and Epidemiological Factors in a Mayan Cohort of Guatemala.

机构信息

Department of Population Health Sciences, University of Utah School of Medicine, Salt Lake City, UT 84108, USA.

Department of Ophthalmology and Visual Sciences, University of Utah School of Medicine, Salt Lake City, UT 84132, USA.

出版信息

Int J Environ Res Public Health. 2021 Jul 6;18(14):7231. doi: 10.3390/ijerph18147231.

Abstract

The Mayan population of Guatemala is understudied within eye and vision research. Studying an observational homogenous, geographically isolated population of individuals seeking eye care may identify unique clinical, demographic, environmental and genetic risk factors for blinding eye disease that can inform targeted and effective screening strategies to achieve better and improved health care distribution. This study served to: (a) identify the ocular health needs within this population; and (b) identify any possible modifiable risk factors contributing to disease pathophysiology within this population. We conducted a cross-sectional study with 126 participants. Each participant completed a comprehensive eye examination, provided a blood sample for genetic analysis, and received a structured core baseline interview for a standardized epidemiological questionnaire at the Salama Lions Club Eye Hospital in Salama, Guatemala. Interpreters were available for translation to the patients' native dialect, to assist participants during their visit. We performed a genome-wide association study for ocular disease association on the blood samples using Illumina's HumanOmni2.5-8 chip to examine single nucleotide polymorphism SNPs in this population. After implementing quality control measures, we performed adjusted logistic regression analysis to determine which genetic and epidemiological factors were associated with eye disease. We found that the most prevalent eye conditions were cataracts (54.8%) followed by pseudoexfoliation syndrome (PXF) (24.6%). The population with both conditions was 22.2%. In our epidemiological analysis, we found that eye disease was significantly associated with advanced age. Cataracts were significantly more common among those living in the 10 districts with the least resources. Furthermore, having cataracts was associated with a greater likelihood of PXF after adjusting for both age and sex. In our genetic analysis, the SNP most nominally significantly associated with PXF lay within the gene KSR2 ( < 1 × 10). Several SNPs were associated with cataracts at genome-wide significance after adjusting for covariates ( < 5 × 10). About seventy five percent of the 33 cataract-associated SNPs lie within 13 genes, with the majority of genes having only one significant SNP (5 × 10). Using bioinformatic tools including PhenGenI, the Ensembl genome browser and literature review, these SNPs and genes have not previously been associated with PXF or cataracts, separately or in combination. This study can aid in understanding the prevalence of eye conditions in this population to better help inform public health planning and the delivery of quality, accessible, and relevant health and preventative care within Salama, Guatemala.

摘要

危地马拉的玛雅人在眼科和视觉研究中研究不足。研究一个寻求眼部护理的同质、地理位置隔离的人群,可以确定致盲眼病的独特临床、人口统计学、环境和遗传风险因素,从而为有针对性和有效的筛查策略提供信息,以实现更好和更完善的医疗保健分配。本研究旨在:(a)确定该人群的眼部健康需求;(b)确定导致该人群疾病发病机制的任何可能可改变的风险因素。我们进行了一项横断面研究,共有 126 名参与者。每位参与者都完成了全面的眼部检查,提供了一份血液样本进行基因分析,并在危地马拉萨马拉的 Salama Lions Club Eye Hospital 接受了标准化流行病学问卷的核心基线结构化访谈。口译员可协助患者使用其母语进行翻译,以帮助参与者完成就诊。我们对血液样本进行了全基因组关联研究,以研究眼部疾病关联,使用 Illumina 的 HumanOmni2.5-8 芯片检查了该人群中的单核苷酸多态性 SNPs。在实施质量控制措施后,我们进行了调整后的逻辑回归分析,以确定与眼部疾病相关的遗传和流行病学因素。我们发现最常见的眼部疾病是白内障(54.8%),其次是假性剥脱综合征(PXF)(24.6%)。同时患有这两种疾病的人群占 22.2%。在我们的流行病学分析中,我们发现眼部疾病与年龄增长显著相关。白内障在资源最少的 10 个地区更为常见。此外,在调整年龄和性别后,白内障与 PXF 的发生几率更高相关。在我们的基因分析中,与 PXF 最显著相关的 SNP 位于 KSR2 基因内(<1×10)。在调整协变量后,有几个 SNPs 与白内障具有全基因组显著性关联(<5×10)。33 个与白内障相关的 SNP 中约有 75%位于 13 个基因内,其中大多数基因只有一个显著 SNP(<5×10)。使用 PhenGenI、Ensembl 基因组浏览器和文献综述等生物信息学工具,这些 SNP 和基因以前没有与 PXF 或白内障单独或联合相关联。本研究有助于了解该人群眼部疾病的流行情况,以便更好地帮助规划公共卫生计划,并在危地马拉的萨马拉提供优质、可及和相关的医疗保健和预防保健。

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