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临床菌株中链霉素抗性基因的分子分析及GidB L101F变体的生物计算分析。

Molecular Analysis of Streptomycin Resistance Genes in Clinical Strains of and Biocomputational Analysis of the GidB L101F Variant.

作者信息

Rodríguez-García Álvaro, Mares-Alejandre Rosa E, Muñoz-Muñoz Patricia L A, Ruvalcaba-Ruiz Samuel, González-Sánchez Ricardo A, Bernáldez-Sarabia Johanna, Meléndez-López Samuel G, Licea-Navarro Alexei F, Ramos-Ibarra Marco A

机构信息

Biotechnology and Biosciences Research Group, Faculty of Chemical Sciences and Engineering, Autonomous University of Baja California, Tijuana 22390, Mexico.

Clinical Diagnostic Laboratory, General Hospital of Tijuana, Tijuana 22010, Mexico.

出版信息

Antibiotics (Basel). 2021 Jul 2;10(7):807. doi: 10.3390/antibiotics10070807.

Abstract

Globally, tuberculosis (TB) remains a prevalent threat to public health. In 2019, TB affected 10 million people and caused 1.4 million deaths. The major challenge for controlling this infectious disease is the emergence and spread of drug-resistant , the causative agent of TB. The antibiotic streptomycin is not a current first-line anti-TB drug. However, WHO recommends its use in patients infected with a streptomycin-sensitive strain. Several mutations in the , and genes have proved association with streptomycin resistance. In this study, we performed a molecular analysis of these genes in clinical isolates to determine the prevalence of known or novel mutations. Here, we describe the genetic analysis outcome. Furthermore, a biocomputational analysis of the GidB L101F variant, the product of a novel mutation detected in during molecular analysis, is also reported as a theoretical approach to study the apparent genotype-phenotype association.

摘要

在全球范围内,结核病(TB)仍然是对公共卫生的普遍威胁。2019年,结核病影响了1000万人,并导致140万人死亡。控制这种传染病的主要挑战是耐药结核分枝杆菌的出现和传播,结核分枝杆菌是结核病的病原体。抗生素链霉素目前不是一线抗结核药物。然而,世界卫生组织建议在感染链霉素敏感菌株的患者中使用它。rpsL、rrs和eis基因中的几个突变已被证明与链霉素耐药性有关。在本研究中,我们对临床分离株中的这些基因进行了分子分析,以确定已知或新突变的发生率。在此,我们描述了基因分析结果。此外,还报告了对分子分析期间在rrs中检测到的新突变产物GidB L101F变体的生物计算分析,作为研究明显基因型-表型关联的一种理论方法。

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