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采用定量参数描述了通过模拟人类胃肠道消化从三文鱼和鲤鱼中释放的肽的性质。

Properties of peptides released from salmon and carp via simulated human-like gastrointestinal digestion described applying quantitative parameters.

机构信息

Faculty of Food Science, Department of Food Biochemistry, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland.

Faculty of Food Science, Department of Dairy Science and Quality Management, University of Warmia and Mazury in Olsztyn, Olsztyn, Poland.

出版信息

PLoS One. 2021 Aug 10;16(8):e0255969. doi: 10.1371/journal.pone.0255969. eCollection 2021.

Abstract

Apart from the classical (experimental) methods, biologically active peptides can be studied via bioinformatics approach, also known as in silico analysis. This study aimed to verify the following research hypothesis: ACE inhibitors and antioxidant peptides can be released from salmon and carp proteins during simulated in silico human-like gastrointestinal digestion. The potential to release biopeptides was evaluated using the BIOPEP-UWM quantitative criteria including the profile of biological activity, frequency of the occurrence (A)/release (AE) of fragments with an ACE inhibitory or antioxidant activity by selected enzymes, and relative frequency of release of bioactive fragments with a given activity by selected enzymes (W). Salmon collagen and myofibrillar proteins of carp turned out to be the best potential source of the searched peptides-ACE inhibitors and antioxidant peptides. Nonetheless, after digestion, the highest numbers of ACE inhibitors and antioxidant peptides were potentially released from the myofibrillar proteins of salmon and carp. Peptide Ranker Score, Pepsite2, and ADMETlab platform were applied to evaluate peptides' bioactivity potential, their safety and drug-like properties. Among the 63 sequences obtained after the simulated digestion of salmon and carp proteins, 30 were considered potential biopeptides. The amino acid sequences of ACE-inhibiting and antioxidant peptides were predominated by P, G, F, W, R, and L. The predicted high probability of absorption of most analyzed peptides and their low toxicity should be considered as their advantage.

摘要

除了经典(实验)方法外,生物活性肽还可以通过生物信息学方法(也称为计算机分析)进行研究。本研究旨在验证以下研究假设:在模拟的人类胃肠道消化过程中,ACE 抑制剂和抗氧化肽可以从三文鱼和鲤鱼的蛋白质中释放出来。使用 BIOPEP-UWM 定量标准评估潜在的生物活性肽释放能力,包括生物活性谱、具有 ACE 抑制或抗氧化活性的片段的出现频率(A)/释放频率(AE),以及所选酶释放具有给定活性的生物活性片段的相对频率(W)。三文鱼胶原蛋白和鲤鱼肌原纤维蛋白被证明是搜索 ACE 抑制剂和抗氧化肽的最佳潜在来源。然而,经过消化后,从三文鱼和鲤鱼的肌原纤维蛋白中潜在释放出最多数量的 ACE 抑制剂和抗氧化肽。肽排名得分(Peptide Ranker Score)、胃蛋白酶切割位点预测(Pepsite2)和 ADMET 实验室平台(ADMETlab)被用于评估肽的生物活性潜力、安全性和类药性。在模拟消化三文鱼和鲤鱼蛋白质后获得的 63 个序列中,有 30 个被认为是潜在的生物活性肽。ACE 抑制肽和抗氧化肽的氨基酸序列主要由 P、G、F、W、R 和 L 组成。大多数分析肽的高吸收概率和低毒性可以被认为是它们的优势。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e6f/8354434/d85f7ccb0d32/pone.0255969.g001.jpg

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