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铁氧还蛋白依赖的氧酶通过杂化自由基-极性途径切除 2-氧戊二酸中的乙烯

Hybrid radical-polar pathway for excision of ethylene from 2-oxoglutarate by an iron oxygenase.

机构信息

Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, USA.

Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA.

出版信息

Science. 2021 Sep 24;373(6562):1489-1493. doi: 10.1126/science.abj4290. Epub 2021 Aug 13.

Abstract

Microbial ethylene-forming enzyme (EFE) converts the C3–C4 fragment of the ubiquitous primary metabolite 2-oxoglutarate (2OG) to its namesake alkene product. This reaction is very different from the simple decarboxylation of 2OG to succinate promoted by related enzymes and has inspired disparate mechanistic hypotheses. We show that EFE produces stereochemically random (equal cis and trans) 1,2-[H]-ethylene from (3,4)-[H]-2OG, appends an oxygen from O on the C1-derived (bi)carbonate, and can be diverted to ω-hydroxylated monoacid products by modifications to 2OG or the enzyme. These results implicate an unusual radical-polar hybrid mechanism involving iron(II)-coordinated acylperoxycarbonate and alkylcarbonate intermediates. The mechanism explains how EFE accesses a high-energy carboxyl radical to initiate its fragmentation cascade, and it hints at capabilities of 2OG-dependent enzymes that may await discovery and exploitation.

摘要

微生物乙烯形成酶 (EFE) 将普遍存在的初级代谢物 2-氧戊二酸 (2OG) 的 C3-C4 片段转化为其同名的烯烃产物。该反应与相关酶促进的 2OG 简单脱羧形成琥珀酸非常不同,激发了不同的机制假设。我们表明,EFE 从 (3,4)-[H]-2OG 产生立体化学随机的 (相等的顺式和反式) 1,2-[H]-乙烯,在 C1 衍生的(双)碳酸盐上添加一个来自 O 的氧,并可通过 2OG 或酶的修饰转化为 ω-羟基化的单酸产物。这些结果表明涉及一种不寻常的自由基-极性杂化机制,涉及铁 (II)-配位的酰基过氧碳酸酯和烷基碳酸酯中间体。该机制解释了 EFE 如何获得高能羧基自由基来启动其片段化级联反应,并且它暗示了可能有待发现和利用的依赖 2OG 的酶的能力。

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