Department of Microbiology, Biochemistry and Molecular Genetics, New Jersey Medical School, Rutgers University, Newark, New Jersey, USA.
Department of Food Science, Rutgers University, New Brunswick, New Jersey, USA.
Appl Environ Microbiol. 2021 Oct 14;87(21):e0137121. doi: 10.1128/AEM.01371-21. Epub 2021 Aug 18.
Phage Phi6 is an enveloped virus considered a possible nonpathogenic surrogate for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and other viral pathogens in transmission studies. Larger input amounts of bacteriophage Phi6 are shown to delay and protect the phage from environmental decay, both when the phages are dried in plastic tubes and when they are stored in saline solution at 4°C. In contrast, when bacteriophage Phi6 is placed in LB (Luria-Bertani) growth medium (instead of saline) prior to placement on the plastic surface, the influence of the starting concentration on viral recovery is negligible. Protection is reflected in the phage half-lives at higher concentrations being longer than the half-lives at lower concentrations. Because experiments supporting the possibility of fomite transmission of SARS-CoV-2 and other viruses rely upon the survival of infectious virus following inoculation onto various surfaces, large initial amounts of input virus on a surface may generate artificially inflated survival times compared to realistic lower levels of virus that a subject would normally encounter. This is not only because there are extra half-lives to go through at higher concentrations but also because the half-lives themselves are extended at higher virus concentrations. It is important to design surface drying experiments for pathogens with realistic levels of input virus and to consider the role of the carrier and matrix if the results are to be clinically relevant. During the coronavirus disease 2019 (COVID-19) pandemic, much attention has been paid to the environmental decay of SARS-CoV-2 due to the proposed transmission of the virus via fomites. However, published experiments have commenced with inocula with very high virus titers, an experimental design not representative of real-life conditions. The study described here evaluated the impact of the initial virus titer on the environmental decay of an enveloped virus, using a nonpathogenic surrogate for the transmission of SARS-CoV-2, enveloped bacteriophage Phi6. We establish that higher concentrations of virus can protect the virus from environmental decay, depending on conditions. This has important implications for stability studies of SARS-CoV-2 and other viruses. Our results point to a limitation in the fundamental methodology that has been used to attribute fomite transmission for almost all respiratory viruses.
噬菌 Phi6 是一种包膜病毒,被认为是严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)和其他病毒在传播研究中的潜在非致病性替代物。研究表明,较大的噬菌体 Phi6 输入量可以延迟和保护噬菌体免受环境衰减,无论是在塑料管中干燥噬菌体还是在 4°C 的盐水中储存噬菌体时。相比之下,当噬菌体 Phi6 在放置在塑料表面之前被置于 LB(Luria-Bertani)生长培养基(而不是盐水)中时,起始浓度对病毒回收的影响可以忽略不计。保护作用反映在较高浓度下噬菌体的半衰期比较低浓度下的半衰期更长。由于支持 SARS-CoV-2 和其他病毒通过污染物传播的可能性的实验依赖于接种到各种表面后感染性病毒的存活,因此表面上输入的大量初始病毒量可能会产生人为夸大的存活时间,与实际情况下受试者通常遇到的较低水平的病毒相比。这不仅是因为在较高浓度下还有额外的半衰期要通过,而且因为在较高病毒浓度下半衰期本身也会延长。对于具有实际输入病毒水平的病原体,设计表面干燥实验非常重要,如果要使结果具有临床相关性,则还需要考虑载体和基质的作用。 在 2019 年冠状病毒病(COVID-19)大流行期间,由于提出了通过污染物传播病毒,因此对 SARS-CoV-2 的环境衰减引起了很多关注。然而,已发表的实验是从非常高的病毒滴度的接种物开始的,这种实验设计不能代表现实生活中的情况。本研究评估了初始病毒滴度对包膜病毒环境衰减的影响,使用包膜噬菌体 Phi6 作为 SARS-CoV-2 传播的非致病性替代物。我们确定,较高浓度的病毒可以根据条件保护病毒免受环境衰减。这对 SARS-CoV-2 和其他病毒的稳定性研究具有重要意义。我们的结果表明,几乎所有呼吸道病毒的污染物传播归因于基本方法存在局限性。