Suppr超能文献

具有罕见C3形态型的大肠杆菌噬菌体vB_EcoP_SU7的全基因组序列

Complete Genome Sequence of vB_EcoP_SU7, a Coliphage with the Rare C3 Morphotype.

作者信息

Koonjan Shazeeda, Cooper Callum J, Nilsson Anders S

机构信息

Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 10691 Stockholm, Sweden.

School of Pharmacy, Pharmaceutical and Cosmetic Sciences, Faculty of Health Sciences and Wellbeing, University of Sunderland, Sunderland SR13SD, UK.

出版信息

Microorganisms. 2021 Jul 24;9(8):1576. doi: 10.3390/microorganisms9081576.

Abstract

Enterotoxigenic (ETEC) strains are an important cause of bacterial diarrheal illness in humans and animals. Infections arising from ETEC could potentially be treated through the use of bacteriophage (phage) therapy, as phages encode for enzymes capable of bacterial cell lysis. vB_EcoP_SU7 was isolated from the Käppala wastewater treatment plant in Stockholm, Sweden, and propagated on an ETEC strain exhibiting the O:139 serovar. Transmission electron microscopy confirmed that vB_EcoP_SU7 belongs to the family and has the rare C3 morphotype of an elongated head. Bioinformatic analyses showed that the genome was 76,626 base pairs long and contained 35 genes with predicted functions. A total of 81 open reading frames encoding proteins with hypothetical function and two encoding proteins of no significant similarity were also found. A putative tRNA gene, which may aid in vB_EcoP_SU7's translation, was also identified. Phylogenetic analyses showed that compared to other , vB_EcoP_SU7 is a rare and is closely related to phages with the uncommon C3 morphotype, such as ECBP2, EK010, vB_EcoP_EcoN5, and vB_EcoP_SU10. Phage vB_EcoP_SU7 has a narrow host range, infecting 11 out of the 137 strains tested, a latency period of 30 min, a burst size of 12 PFU/cell, and an adsorption rate of 8.78 × 10 mL/min five minutes post infection. With a limited host range and poor infection kinetics, it is unlikely that SU7 can be a standalone phage used for therapeutic purposes; rather, it must be used in combination with other phages for broad-spectrum therapeutic success.

摘要

产肠毒素大肠杆菌(ETEC)菌株是人类和动物细菌性腹泻疾病的重要病因。ETEC引起的感染有可能通过噬菌体疗法进行治疗,因为噬菌体编码能够裂解细菌细胞的酶。vB_EcoP_SU7是从瑞典斯德哥尔摩的卡帕拉污水处理厂分离出来的,并在一株表现出O:139血清型的ETEC菌株上进行增殖。透射电子显微镜证实vB_EcoP_SU7属于该家族,具有罕见的细长头部C3形态型。生物信息学分析表明,该基因组长度为76,626个碱基对,包含35个具有预测功能的基因。还发现了总共81个编码具有假设功能蛋白质的开放阅读框和两个编码无显著相似性蛋白质的开放阅读框。还鉴定出一个可能有助于vB_EcoP_SU7翻译的假定tRNA基因。系统发育分析表明,与其他噬菌体相比,vB_EcoP_SU7是一种罕见的噬菌体,与具有不常见C3形态型的噬菌体密切相关,如ECBP2、EK010、vB_EcoP_EcoN5和vB_EcoP_SU10。噬菌体vB_EcoP_SU7宿主范围狭窄,在测试的137株ETEC菌株中能感染11株,潜伏期为30分钟,裂解量为12个噬菌斑形成单位/细胞,感染后五分钟的吸附率为8.78×10 mL/分钟。由于宿主范围有限且感染动力学不佳,SU7不太可能作为单一噬菌体用于治疗目的;相反,它必须与其他噬菌体联合使用才能取得广谱治疗成功。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9cb4/8399022/463e6e183737/microorganisms-09-01576-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验