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毛竹中转化酶基因的鉴定与表达分析揭示其潜在的干旱胁迫功能

Identification and Expression Analyses of Invertase Genes in Moso Bamboo Reveal Their Potential Drought Stress Functions.

作者信息

Zhu Chenglei, Yang Kebin, Li Guangzhu, Li Ying, Gao Zhimin

机构信息

Institute of Gene Science and Industrialization for Bamboo and Rattan Resources, International Center for Bamboo and Rattan, Beijing, China.

Key Laboratory of National Forestry and Grassland Administration, Beijing for Bamboo and Rattan Science and Technology, Beijing, China.

出版信息

Front Genet. 2021 Aug 30;12:696300. doi: 10.3389/fgene.2021.696300. eCollection 2021.

Abstract

Invertases (INVs) can irreversibly hydrolyze sucrose into fructose and glucose, which play principal roles in carbon metabolism and responses to various stresses in plants. However, little is known about the INV family in bamboos, especially their potential function in drought stress. In this study, 29 s were identified in moso bamboo (). They were clustered into alkaline/neutral invertase (NINV) and acid invertase (AINV) groups based on the gene structures, conserved motifs, and phylogenetic analysis results. The collinearity analysis showed nine segmental duplication pairs within s, and 25 pairs were detected between s and s. s may have undergone strong purification selection during evolution, and a variety of stress and phytohormone-related regulatory elements were found in the promoters of s. The tissue-specific expression analysis showed that s were differentially expressed in various moso bamboo tissues, which suggested that they showed functional diversity. Both the RNA-seq and quantitative real-time PCR results indicated that four s were significantly upregulated under drought stress. Co-expression network and Pearson's correlation coefficient analyses showed that these s co-expressed positively with sugar and water transport genes (s), and the changes were consistent with sugar content. Overall, we speculate that the identified s are spatiotemporally expressed, which enables them to participate in moso bamboo growth and development. Furthermore, s, together with s, also seem to play vital roles in the response to drought stress. These results provide a comprehensive information resource for s, which will facilitate further study of the molecular mechanism underlying s involvement in the response to drought stress in moso bamboo.

摘要

转化酶(INVs)能将蔗糖不可逆地水解成果糖和葡萄糖,在植物碳代谢及对各种胁迫的响应中起主要作用。然而,关于竹子中的INVs家族,尤其是它们在干旱胁迫中的潜在功能,人们了解甚少。在本研究中,在毛竹中鉴定出了29个(此处原文“29 s”表述有误,推测可能是29个基因之类的,暂按此翻译)。基于基因结构、保守基序和系统发育分析结果,它们被聚类为碱性/中性转化酶(NINV)和酸性转化酶(AINV)组。共线性分析表明,(此处原文不完整,推测是在某些基因之间)存在9对片段重复,并且在(此处原文不完整)和(此处原文不完整)之间检测到25对。(此处原文不完整,推测是某些基因)在进化过程中可能经历了强烈的纯化选择,并且在(此处原文不完整,推测是某些基因)的启动子中发现了多种与胁迫和植物激素相关的调控元件。组织特异性表达分析表明,(此处原文不完整,推测是某些基因)在毛竹的各种组织中差异表达,这表明它们具有功能多样性。RNA测序和实时定量PCR结果均表明,4个(此处原文不完整,推测是某些基因)在干旱胁迫下显著上调。共表达网络和皮尔逊相关系数分析表明,这些(此处原文不完整,推测是某些基因)与糖和水运输基因(此处原文不完整)正共表达,并且变化与糖含量一致。总体而言,我们推测所鉴定的(此处原文不完整,推测是某些基因)在时空上表达,这使它们能够参与毛竹的生长发育。此外,(此处原文不完整,推测是某些基因)与(此处原文不完整)一起,似乎在对干旱胁迫的响应中也起着至关重要的作用。这些结果为(此处原文不完整,推测是某些基因)提供了全面的信息资源,这将有助于进一步研究毛竹中(此处原文不完整,推测是某些基因)参与干旱胁迫响应的分子机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31ef/8435750/f3e3f96f5354/fgene-12-696300-g001.jpg

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