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利用全基因组鉴定、鉴定和表达分析鉴定番茄抗灰叶斑病中的 JAZ 基因家族。

Genome-Wide Identification, Characterization and Expression Analysis of the JAZ Gene Family in Resistance to Gray Leaf Spots in Tomato.

机构信息

School of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China.

出版信息

Int J Mol Sci. 2021 Sep 15;22(18):9974. doi: 10.3390/ijms22189974.

Abstract

The plant disease resistance system involves a very complex regulatory network in which jasmonates play a key role in response to external biotic or abiotic stresses. As inhibitors of the jasmonic acid (JA) signaling pathway, JASMONATE ZIM domain (JAZ) proteins have been identified in many plant species, and their functions are gradually being clarified. In this study, 26 genes were identified in tomato. The physical and chemical properties, predicted subcellular localization, gene structure, cis-acting elements, and interspecies collinearity of 26 genes were subsequently analyzed. RNA-seq data combined with qRT-PCR analysis data showed that the expression of most genes were induced in response to , methyl jasmonate (MeJA) and salicylic acid (SA). Tobacco rattle virus RNA2-based VIGS vector (TRV2)- plants were more resistant to tomato gray leaf spots than TRV2-00 plants. Therefore, we speculated that played a negative regulatory role in tomato resistance to gray leaf spots. Based on combining the results of previous studies and those of our experiments, we speculated that might be closely related to JA and SA hormone regulation. interacted with , , , and other resistance-related genes to form a regulatory network, and these genes played an important role in the regulation of tomato gray leaf spots. The subcellular localization results showed that the gene was located in the nucleus. Overall, this study is the first to identify and analyze family genes in tomato via bioinformatics approaches, clarifying the regulatory role of genes in tomato resistance to gray leaf spots and providing new ideas for improving plant disease resistance.

摘要

植物疾病抗性系统涉及一个非常复杂的调控网络,茉莉酸在应对外部生物或非生物胁迫中起着关键作用。作为茉莉酸(JA)信号通路的抑制剂,茉莉酸 ZIM 结构域(JAZ)蛋白已在许多植物物种中被鉴定出来,其功能也逐渐被阐明。本研究在番茄中鉴定出 26 个基因。随后对 26 个基因的理化性质、预测亚细胞定位、基因结构、顺式作用元件和种间共线性进行了分析。RNA-seq 数据结合 qRT-PCR 分析数据表明,大多数基因的表达均受乙烯(ETH)、茉莉酸甲酯(MeJA)和水杨酸(SA)的诱导。基于烟草脆裂病毒 RNA2 的 VIGS 载体(TRV2)-植物比 TRV2-00 植物对番茄灰斑病的抗性更强。因此,我们推测 基因在番茄对灰斑病的抗性中起负调控作用。基于结合先前研究和我们实验的结果,我们推测 基因可能与 JA 和 SA 激素调节密切相关。 与 、 、 等抗病相关基因相互作用,形成一个调控网络,这些基因在番茄灰斑病的调控中发挥着重要作用。亚细胞定位结果表明, 基因定位于细胞核。总体而言,本研究首次通过生物信息学方法鉴定和分析了番茄中的 家族基因,阐明了 基因在番茄对灰斑病抗性中的调控作用,为提高植物抗病性提供了新的思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e1c/8469637/e073cb8e8e4d/ijms-22-09974-g001.jpg

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