IEEE Trans Med Imaging. 2022 Feb;41(2):491-499. doi: 10.1109/TMI.2021.3116298. Epub 2022 Feb 2.
In MRI, deep neural networks have been proposed to reconstruct diffusion model parameters. However, the inputs of the networks were designed for a specific diffusion gradient scheme (i.e., diffusion gradient directions and numbers) and a specific b-value that are the same as the training data. In this study, a new deep neural network, referred to as DIFFnet, is developed to function as a generalized reconstruction tool of the diffusion-weighted signals for various gradient schemes and b-values. For generalization, diffusion signals are normalized in a q-space and then projected and quantized, producing a matrix (Qmatrix) as an input for the network. To demonstrate the validity of this approach, DIFFnet is evaluated for diffusion tensor imaging (DIFFnet) and for neurite orientation dispersion and density imaging (DIFFnet). In each model, two datasets with different gradient schemes and b-values are tested. The results demonstrate accurate reconstruction of the diffusion parameters at substantially reduced processing time (approximately 8.7 times and 2240 times faster processing time than conventional methods in DTI and NODDI, respectively; less than 4% mean normalized root-mean-square errors (NRMSE) in DTI and less than 8% in NODDI). The generalization capability of the networks was further validated using reduced numbers of diffusion signals from the datasets and a public dataset from Human Connection Project. Different from previously proposed deep neural networks, DIFFnet does not require any specific gradient scheme and b-value for its input. As a result, it can be adopted as an online reconstruction tool for various complex diffusion imaging.
在 MRI 中,已经提出了深度神经网络来重建扩散模型参数。然而,网络的输入是针对特定的扩散梯度方案(即扩散梯度方向和数量)和特定的 b 值设计的,这些值与训练数据相同。在这项研究中,开发了一种新的深度神经网络,称为 DIFFnet,作为一种用于各种梯度方案和 b 值的扩散加权信号的通用重建工具。为了实现泛化,扩散信号在 q 空间中进行归一化,然后进行投影和量化,产生一个矩阵(Qmatrix)作为网络的输入。为了验证这种方法的有效性,DIFFnet 用于扩散张量成像(DIFFnet)和神经丝取向分散和密度成像(DIFFnet)进行了评估。在每个模型中,使用具有不同梯度方案和 b 值的两个数据集进行测试。结果表明,在大大减少处理时间的情况下,能够准确重建扩散参数(在 DTI 和 NODDI 中分别比传统方法快约 8.7 倍和 2240 倍;在 DTI 中平均归一化均方根误差(NRMSE)小于 4%,在 NODDI 中小于 8%)。通过使用数据集和人类连接项目的公共数据集的较少扩散信号进一步验证了网络的泛化能力。与以前提出的深度神经网络不同,DIFFnet 不需要任何特定的梯度方案和 b 值作为其输入。因此,它可以被采用为各种复杂扩散成像的在线重建工具。