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加蓬国家公园陆生野生动物肠杆菌固有表型抗菌药物耐药性水平较高。

High level of intrinsic phenotypic antimicrobial resistance in enterobacteria from terrestrial wildlife in Gabonese national parks.

机构信息

Departement Ecologie Animal, Institut de Recherche en Ecologie Tropicale (IRET), Libreville, Gabon.

Centre Interdisciplinaire de Recherches Médicales de Franceville (CIRMF), Franceville, Gabon.

出版信息

PLoS One. 2021 Oct 12;16(10):e0257994. doi: 10.1371/journal.pone.0257994. eCollection 2021.

Abstract

Data on the prevalence of antibiotic resistance in Enterobacteriaceae in African wildlife are still relatively limited. The aim of this study was to estimate the prevalence of phenotypic intrinsic and acquired antimicrobial resistance of enterobacteria from several species of terrestrial wild mammals in national parks of Gabon. Colony culture and isolation were done using MacConkey agar. Isolates were identified using the VITEK 2 and MALDI-TOF methods. Antibiotic susceptibility was analysed and interpreted according to the European Committee on Antimicrobial Susceptibility Testing guidelines. The preliminary test for ESBL-producing Enterobacteriaceae was performed by replicating enterobacterial colonies on MacConkey agar supplemented with 2 mg/L cefotaxime (MCA+CTX). Extended-spectrum beta-lactamase (ESBL) production was confirmed with the double-disc synergy test (DDST). The inhibition zone diameters were read with SirScan. Among the 130 bacterial colonies isolated from 125 fecal samples, 90 enterobacterial isolates were identified. Escherichia coli (61%) was the most prevalent, followed by Enterobacter cloacae (8%), Proteus mirabilis (8%), Klebsiella variicola (7%), Klebsiella aerogenes (7%), Klebsiella oxytoca (4%), Citrobacter freundii (3%), Klebsiella pneumoniae (1%) and Serratia marcescens (1%). Acquired resistance was carried by E. coli (11% of all E. coli isolates) and E. cloacae (3% of all E. cloacae) isolates, while intrinsic resistance was detected in all the other resistant isolates (n = 31); K. variicola, K. oxytoca, K. pneumoniae, E. cloacae, K. aerogenes, S. marcescens and P. mirabilis). Our data show that most strains isolated in protected areas in Gabon are wild type isolates and carry intrinsic resistance rather than acquired resistance.

摘要

非洲野生动物中肠杆菌科抗生素耐药性的数据仍然相对有限。本研究的目的是估计加蓬国家公园内几种陆地野生动物肠道细菌的表型固有和获得性抗微生物药物耐药率。使用麦康凯琼脂进行菌落培养和分离。使用 VITEK 2 和 MALDI-TOF 方法进行鉴定。根据欧洲抗菌药物敏感性测试委员会的指南分析和解释抗生素敏感性。通过在添加 2 mg/L 头孢噻肟的麦康凯琼脂(MCA+CTX)上复制肠杆菌菌落来初步检测产 ESBL 的肠杆菌科。使用双碟协同试验(DDST)确认超广谱β-内酰胺酶(ESBL)的产生。用 SirScan 读取抑菌圈直径。从 125 份粪便样本中分离出的 130 个细菌菌落中,鉴定出 90 个肠杆菌属分离物。大肠杆菌(61%)最为普遍,其次是阴沟肠杆菌(8%)、奇异变形杆菌(8%)、产酸克雷伯菌(7%)、肺炎克雷伯菌(7%)、产酸克雷伯菌(4%)、弗劳地柠檬酸杆菌(3%)、肺炎克雷伯菌(1%)和粘质沙雷氏菌(1%)。获得性耐药由大肠杆菌(所有大肠杆菌分离株的 11%)和阴沟肠杆菌(所有阴沟肠杆菌分离株的 3%)携带,而固有耐药则在所有其他耐药分离株中检测到(n=31);产酸克雷伯菌、产酸克雷伯菌、肺炎克雷伯菌、阴沟肠杆菌、肺炎克雷伯菌、粘质沙雷氏菌和奇异变形杆菌)。我们的数据表明,在加蓬保护区中分离出的大多数菌株都是野生型菌株,携带固有耐药性而不是获得性耐药性。

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