• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

全大肠杆菌无细胞转录翻译工具包3.0:无细胞合成生物学平台的新功能

The all-E. coliTXTL toolbox 3.0: new capabilities of a cell-free synthetic biology platform.

作者信息

Garenne David, Thompson Seth, Brisson Amaury, Khakimzhan Aset, Noireaux Vincent

机构信息

School of Physics and Astronomy, University of Minnesota, Minneapolis, MN, USA.

出版信息

Synth Biol (Oxf). 2021 Aug 4;6(1):ysab017. doi: 10.1093/synbio/ysab017. eCollection 2021.

DOI:10.1093/synbio/ysab017
PMID:34712841
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8546610/
Abstract

The new generation of cell-free gene expression systems enables the prototyping and engineering of biological systems over a remarkable scope of applications and physical scales. As the utilization of DNA-directed protein synthesis expands in scope, developing more powerful cell-free transcription-translation (TXTL) platforms remains a major goal to either execute larger DNA programs or improve cell-free biomanufacturing capabilities. In this work, we report the capabilities of the all- TXTL toolbox 3.0, a multipurpose cell-free expression system specifically developed for synthetic biology. In non-fed batch-mode reactions, the synthesis of the fluorescent reporter protein eGFP (enhanced green fluorescent protein) reaches 4 mg/ml. In synthetic cells, consisting of liposomes loaded with a TXTL reaction, eGFP is produced at concentrations of >8 mg/ml when the chemical building blocks feeding the reaction diffuse through membrane channels to facilitate exchanges with the outer solution. The bacteriophage T7, encoded by a genome of 40 kb and ∼60 genes, is produced at a concentration of 10 PFU/ml (plaque forming unit/ml). This TXTL system extends the current cell-free expression capabilities by offering unique strength and properties, for testing regulatory elements and circuits, biomanufacturing biologics or building synthetic cells.

摘要

新一代无细胞基因表达系统能够在广泛的应用和物理尺度范围内对生物系统进行原型设计和工程改造。随着DNA指导的蛋白质合成应用范围的扩大,开发更强大的无细胞转录-翻译(TXTL)平台仍然是执行更大DNA程序或提高无细胞生物制造能力的主要目标。在这项工作中,我们报告了全TXTL工具箱3.0的能力,这是一种专门为合成生物学开发的多功能无细胞表达系统。在非补料分批模式反应中,荧光报告蛋白增强型绿色荧光蛋白(eGFP)的合成量达到4毫克/毫升。在由装载TXTL反应的脂质体组成的合成细胞中,当为反应提供化学构建模块的物质通过膜通道扩散以促进与外部溶液的交换时,eGFP的产生浓度>8毫克/毫升。由40 kb基因组和约60个基因编码的噬菌体T7,其产生浓度为10个噬菌斑形成单位/毫升(PFU/ml)。该TXTL系统通过提供独特的优势和特性,扩展了当前的无细胞表达能力,可用于测试调控元件和回路、生物制造生物制品或构建合成细胞。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/a79b2e6b9cc7/ysab017f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/6f3ac2ef3e6b/ysab017f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/b2826f96863b/ysab017f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/7c161c29826b/ysab017f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/a79b2e6b9cc7/ysab017f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/6f3ac2ef3e6b/ysab017f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/b2826f96863b/ysab017f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/7c161c29826b/ysab017f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ac8b/8546610/a79b2e6b9cc7/ysab017f4.jpg

相似文献

1
The all-E. coliTXTL toolbox 3.0: new capabilities of a cell-free synthetic biology platform.全大肠杆菌无细胞转录翻译工具包3.0:无细胞合成生物学平台的新功能
Synth Biol (Oxf). 2021 Aug 4;6(1):ysab017. doi: 10.1093/synbio/ysab017. eCollection 2021.
2
Synthetic Biology with an All E. coli TXTL System: Quantitative Characterization of Regulatory Elements and Gene Circuits.基于全大肠杆菌无细胞表达系统的合成生物学:调控元件与基因回路的定量表征
Methods Mol Biol. 2018;1772:61-93. doi: 10.1007/978-1-4939-7795-6_4.
3
Synthesis of Infectious Bacteriophages in an E. coli-based Cell-free Expression System.基于大肠杆菌的无细胞表达系统中感染性噬菌体的合成。
J Vis Exp. 2017 Aug 17(126):56144. doi: 10.3791/56144.
4
Short DNA containing χ sites enhances DNA stability and gene expression in E. coli cell-free transcription-translation systems.含有χ位点的短DNA可增强大肠杆菌无细胞转录-翻译系统中的DNA稳定性和基因表达。
Biotechnol Bioeng. 2017 Sep;114(9):2137-2141. doi: 10.1002/bit.26333. Epub 2017 May 23.
5
TXTL-based approach to synthetic cells.基于无细胞转录翻译体系的合成细胞方法。
Methods Enzymol. 2019;617:217-239. doi: 10.1016/bs.mie.2018.12.015. Epub 2019 Jan 30.
6
Quantitative modeling of transcription and translation of an all-E. coli cell-free system.全大肠杆菌无细胞体系转录和翻译的定量建模。
Sci Rep. 2019 Aug 19;9(1):11980. doi: 10.1038/s41598-019-48468-8.
7
Cell-Free Synthesis and Quantitation of Bacteriophages.无细胞合成和噬菌体定量分析。
Methods Mol Biol. 2024;2760:447-461. doi: 10.1007/978-1-0716-3658-9_25.
8
The All E. coli TX-TL Toolbox 2.0: A Platform for Cell-Free Synthetic Biology.全大肠杆菌无细胞转录翻译工具包2.0:无细胞合成生物学平台
ACS Synth Biol. 2016 Apr 15;5(4):344-55. doi: 10.1021/acssynbio.5b00296. Epub 2016 Feb 9.
9
Engineering DNA nanotubes for resilience in an TXTL system.设计用于无细胞合成体系中增强韧性的DNA纳米管。
Synth Biol (Oxf). 2018 Feb 5;3(1):ysy001. doi: 10.1093/synbio/ysy001. eCollection 2018.
10
Cell-free TXTL synthesis of infectious bacteriophage T4 in a single test tube reaction.在单一试管反应中通过无细胞转录-翻译体系合成感染性噬菌体T4
Synth Biol (Oxf). 2018 Jan 22;3(1):ysy002. doi: 10.1093/synbio/ysy002. eCollection 2018.

引用本文的文献

1
reconstitution of biological oscillators.生物振荡器的重构
Front Cell Dev Biol. 2025 Aug 12;13:1632969. doi: 10.3389/fcell.2025.1632969. eCollection 2025.
2
Dimensions, stability, and deformability of DOPC-cholesterol giant unilamellar vesicles formed by droplet transfer.通过液滴转移形成的二油酰磷脂酰胆碱-胆固醇巨型单层囊泡的尺寸、稳定性和可变形性
Open Res Eur. 2025 Aug 4;5:77. doi: 10.12688/openreseurope.19149.2. eCollection 2025.
3
Discovery of diverse and high-quality mRNA capping enzymes through a language model-enabled platform.

本文引用的文献

1
Building protein networks in synthetic systems from the bottom-up.从底层构建合成系统中的蛋白质网络。
Biotechnol Adv. 2021 Jul-Aug;49:107753. doi: 10.1016/j.biotechadv.2021.107753. Epub 2021 Apr 12.
2
Reconstituting Natural Cell Elements in Synthetic Cells.在合成细胞中重建天然细胞元件。
Adv Biol (Weinh). 2021 Mar;5(3):e2000188. doi: 10.1002/adbi.202000188. Epub 2021 Feb 7.
3
Cell-free protein synthesis: advances on production process for biopharmaceuticals and immunobiological products.无细胞蛋白质合成:生物制药和免疫生物制品生产工艺的进展。
通过一个基于语言模型的平台发现多样且高质量的mRNA加帽酶。
Sci Adv. 2025 Apr 11;11(15):eadt0402. doi: 10.1126/sciadv.adt0402. Epub 2025 Apr 9.
4
A modular cell-free protein biosensor platform using split T7 RNA polymerase.一种使用分裂T7 RNA聚合酶的模块化无细胞蛋白质生物传感器平台。
Sci Adv. 2025 Feb 21;11(8):eado6280. doi: 10.1126/sciadv.ado6280.
5
Cell-free expression system: a promising platform for bacteriophage production and engineering.无细胞表达系统:噬菌体生产与工程改造的一个有前景的平台。
Microb Cell Fact. 2025 Feb 17;24(1):42. doi: 10.1186/s12934-025-02661-9.
6
Challenges in observing transcription-translation for bottom-up synthetic biology.自下而上合成生物学中观察转录-翻译过程的挑战。
QRB Discov. 2025 Jan 3;6:e5. doi: 10.1017/qrd.2024.27. eCollection 2025.
7
Cell-Free Systems to Mimic and Expand Metabolism.用于模拟和扩展新陈代谢的无细胞系统。
ACS Synth Biol. 2025 Feb 21;14(2):316-322. doi: 10.1021/acssynbio.4c00729. Epub 2025 Jan 29.
8
A cell-free strategy for host-specific profiling of intracellular antibiotic sensitivity and resistance.一种用于细胞内抗生素敏感性和耐药性宿主特异性分析的无细胞策略。
NPJ Antimicrob Resist. 2023 Dec 18;1(1):16. doi: 10.1038/s44259-023-00018-z.
9
Beyond , Pharmaceutical Molecule Production in Cell-Free Systems and the Use of Noncanonical Amino Acids Therein.此外,无细胞系统中的药物分子生产及其在其中使用非天然氨基酸。
Chem Rev. 2025 Feb 12;125(3):1303-1331. doi: 10.1021/acs.chemrev.4c00126. Epub 2025 Jan 22.
10
Long-Term Protein Synthesis with PURE in a Mesoscale Dialysis System.在中尺度透析系统中使用PURE进行长期蛋白质合成。
ACS Synth Biol. 2025 Jan 17;14(1):290-295. doi: 10.1021/acssynbio.4c00618. Epub 2025 Jan 5.
Biotechniques. 2021 Feb;70(2):126-133. doi: 10.2144/btn-2020-0155. Epub 2021 Jan 20.
4
From deterministic to fuzzy decision-making in artificial cells.从人工细胞的确定性决策到模糊决策。
Nat Commun. 2020 Nov 6;11(1):5648. doi: 10.1038/s41467-020-19395-4.
5
Cell-free biogenesis of bacterial division proto-rings that can constrict liposomes.无细胞细菌分裂原环的生物发生,该原环可以收缩脂质体。
Commun Biol. 2020 Sep 30;3(1):539. doi: 10.1038/s42003-020-01258-9.
6
An educational module to explore CRISPR technologies with a cell-free transcription-translation system.一个利用无细胞转录-翻译系统探索CRISPR技术的教育模块。
Synth Biol (Oxf). 2019 Jan 21;4(1):ysz005. doi: 10.1093/synbio/ysz005. eCollection 2019.
7
Cell-free TXTL synthesis of infectious bacteriophage T4 in a single test tube reaction.在单一试管反应中通过无细胞转录-翻译体系合成感染性噬菌体T4
Synth Biol (Oxf). 2018 Jan 22;3(1):ysy002. doi: 10.1093/synbio/ysy002. eCollection 2018.
8
Genetically controlled membrane synthesis in liposomes.脂质体中的遗传控制膜合成。
Nat Commun. 2020 Aug 28;11(1):4317. doi: 10.1038/s41467-020-17863-5.
9
Methodologies for preparation of prokaryotic extracts for cell-free expression systems.用于无细胞表达系统的原核提取物制备方法。
Synth Syst Biotechnol. 2020 Jul 30;5(4):252-267. doi: 10.1016/j.synbio.2020.07.006. eCollection 2020 Dec.
10
Programming multi-protein assembly by gene-brush patterns and two-dimensional compartment geometry.通过基因刷模式和二维隔室几何形状来编程多蛋白组装。
Nat Nanotechnol. 2020 Sep;15(9):783-791. doi: 10.1038/s41565-020-0720-7. Epub 2020 Jul 20.