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生物振荡器的重构

reconstitution of biological oscillators.

作者信息

van der Vlist Ewan, de Vries Susan, Kamenz Julia

机构信息

Molecular Systems Biology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, Netherlands.

出版信息

Front Cell Dev Biol. 2025 Aug 12;13:1632969. doi: 10.3389/fcell.2025.1632969. eCollection 2025.

Abstract

Oscillations are fundamental to biological timekeeping and organization, yet understanding how their complex temporal dynamics emerge from underlying molecular interactions remains a significant challenge. reconstitution offers a powerful bottom-up approach to dissect the minimal components, interactions, and parameters required to generate these rhythmic behaviors. Biochemical reconstruction of minimal oscillators outside of their native cellular contexts allows the direct interrogation of the biochemical, biophysical, and systems-level properties that govern oscillatory dynamics and unravel the governing fundamental design principles. In this review, we summarize the theoretical foundations of biological oscillators and outline the major experimental challenges associated with their reconstitution. We highlight recent advances in the reconstitution of diverse oscillator types, including the cyanobacterial circadian clock, the Min system from , and synthetic genetic oscillators such as the repressilator. These case studies illustrate how reconstitution efforts have yielded key mechanistic insights and driven technological innovation. We conclude by exploring emerging tools and future directions that promise to overcome current limitations and broaden the applicability of oscillator reconstitution-both to additional biological systems and to a wider range of scientific questions.

摘要

振荡是生物计时和组织的基础,但要理解它们复杂的时间动态如何从潜在的分子相互作用中产生,仍然是一项重大挑战。重组提供了一种强大的自下而上的方法,用于剖析产生这些节律行为所需的最小组成部分、相互作用和参数。在其天然细胞环境之外对最小振荡器进行生化重建,可以直接探究控制振荡动力学的生化、生物物理和系统水平特性,并揭示其基本设计原则。在本综述中,我们总结了生物振荡器的理论基础,并概述了与其重组相关的主要实验挑战。我们重点介绍了不同类型振荡器重组的最新进展,包括蓝藻生物钟、大肠杆菌的Min系统以及诸如阻遏振荡子等合成基因振荡器。这些案例研究说明了重组工作如何产生关键的机制性见解并推动技术创新。我们通过探索新兴工具和未来方向来结束本文,这些工具和方向有望克服当前的局限性,并扩大振荡器重组在其他生物系统以及更广泛科学问题中的适用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deaf/12378183/34ba2e814a9e/fcell-13-1632969-g001.jpg

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