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gen. nov., sp. nov., 一个新的家族成员, 从玉米喂养的沼气发酵器中分离出来。

gen. nov., sp. nov., a new member of the family , isolated from a maize-fed biogas fermenter.

机构信息

Technical University of Munich, Chair of Microbiology, Emil-Ramann-Str. 4, 85354 Freising, Germany.

Faculty of Technology, Bielefeld University, Universitätsstr. 25, 33615 Bielefeld, Germany.

出版信息

Int J Syst Evol Microbiol. 2021 Nov;71(11). doi: 10.1099/ijsem.0.005044.

Abstract

Strain MD1 is an anaerobic, Gram-stain-negative bacterium isolated from a lab-scale biogas fermenter fed with maize silage. It has a rod-shaped morphology with peritrichously arranged appendages and forms long chains of cells and coccoid structures. The colonies of MD1 were white, circular, slightly convex and had a smooth rim. The isolate is mesophilic, displaying growth between 25 and 45 °C with an optimum at 40 °C. It grew at pH values of pH 6.7-8.2 (optimum, pH 7.1) and tolerated the addition of up to 1.5% (w/v) NaCl to the medium. The main cellular fatty acids of MD1 are C DMA and C. Strain MD1 fermented xylose, arabinose, glucose, galactose, cellobiose, maltose, maltodextrin10, lactose starch, and xylan, producing mainly 2-propanol and acetic acid. The genome of the organism has a total length of 4163427 bp with a G+C content of 38.5 mol%. The two closest relatives to MD1 are P3M-3 and FH052 with 96.44 or 95.8 % 16S rRNA gene sequence similarity and POCP values of 46.58 and 50.58%, respectively. As MD1 showed saccharolytic and xylanolytic properties, it may play an important role in the biogas fermentation process. Closely related variants of MD1 were also abundant in microbial communities involved in methanogenic fermentation. Based on morphological, phylogenetic and genomic data, the isolated strain can be considered as representing a novel genus in the family , for which the name gen. nov., sp. nov. (type strain MD1=DSM 110715=JCM 39125) is proposed.

摘要

MD1 菌株是一株从实验室规模的沼气发酵罐中分离得到的厌氧、革兰氏阴性细菌,以玉米青贮为底物。它的形态为杆状,周身生有纤毛,可形成长链的细胞和球形结构。MD1 菌株的菌落为白色、圆形、略微凸起,边缘光滑。该分离株为中温菌,在 25-45°C 范围内生长,最适温度为 40°C。其最适 pH 值为 6.7-8.2(最佳 pH 值为 7.1),能耐受培养基中添加高达 1.5%(w/v)的 NaCl。MD1 的主要细胞脂肪酸为 C DMA 和 C 。MD1 菌株可发酵木糖、阿拉伯糖、葡萄糖、半乳糖、纤维二糖、麦芽糖、麦芽糊精 10、乳糖、淀粉和木聚糖,主要产生 2-丙醇和乙酸。该生物体的基因组全长为 4163427 bp,GC 含量为 38.5 mol%。与 MD1 最接近的两种菌株是 P3M-3 和 FH052,其 16S rRNA 基因序列相似度分别为 96.44%和 95.8%,POCP 值分别为 46.58%和 50.58%。由于 MD1 具有糖化和木聚糖酶解特性,它可能在沼气发酵过程中发挥重要作用。与 MD1 密切相关的变体在参与甲烷发酵的微生物群落中也很丰富。基于形态学、系统发育和基因组数据,该分离株可被视为代表一个新的属,提议将其命名为. 属,新种(模式菌株 MD1=DSM 110715=JCM 39125)。

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