Rasool Mahmood, Natesan Pushparaj Peter, Karim Sajjad
Center of Excellence in Genomic Medicine Research, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah, Saudi Arabia.
Department of Medical Laboratory Technology, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah, Saudi Arabia.
Saudi J Biol Sci. 2021 Nov;28(11):6045-6049. doi: 10.1016/j.sjbs.2021.09.031. Epub 2021 Sep 17.
Colorectal cancer (CRC) is one of the leading causes of death in Saudi Arabia. CRC mostly affects older age groups, but now a days it also appears frequently at a young age. However, the complete genetic etiology of CRC remains unknown. To identify the genetic factors responsible for this cancer type and to search for biomarkers for early diagnosis and prevention, we collected sixteen CRC tumor tissue samples and six normal colon tissues and extracted mRNA and synthesized cDNA. We then performed microarray transcriptomic profiling of Saudi patients with colon cancer. Gene expression was analyzed using Partek Genomics Suite, and principal component analysis (PCA) was performed to separate the different clusters of colon cancer and healthy tissues. Distinct differences in gene expression profiles were observed between colon cancer and normal tissue samples. Subsequently, we validated gene expression using real-time PCR. We found that the C-X-C motif chemokine ligand 8 () gene was expressed most in CRC samples. expressed 25.6 folds more in CRC tissues than in healthy tissues. In conclusion, we found that is the chief biomarker gene that is expressed most in CRC and plays an important role in tumor progression and metastasis.
结直肠癌(CRC)是沙特阿拉伯主要的死亡原因之一。CRC主要影响老年人群,但如今在年轻人群中也频繁出现。然而,CRC完整的遗传病因仍不清楚。为了确定导致这种癌症类型的遗传因素,并寻找早期诊断和预防的生物标志物,我们收集了16份CRC肿瘤组织样本和6份正常结肠组织,提取了mRNA并合成了cDNA。然后,我们对沙特结肠癌患者进行了微阵列转录组分析。使用Partek基因组学套件分析基因表达,并进行主成分分析(PCA)以区分结肠癌和健康组织的不同聚类。在结肠癌和正常组织样本之间观察到基因表达谱的明显差异。随后,我们使用实时PCR验证基因表达。我们发现C-X-C基序趋化因子配体8()基因在CRC样本中表达最多。在CRC组织中的表达比在健康组织中高25.6倍。总之,我们发现是在CRC中表达最多的主要生物标志物基因,并且在肿瘤进展和转移中起重要作用。