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The EnteroBase user's guide, with case studies on transmissions, phylogeny, and core genomic diversity.《EnteroBase 用户指南》,内含传播、系统发育和核心基因组多样性方面的案例研究。
Genome Res. 2020 Jan;30(1):138-152. doi: 10.1101/gr.251678.119. Epub 2019 Dec 6.
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CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database.CARD 2020:利用综合抗生素耐药数据库进行抗生素耐药组监测。
Nucleic Acids Res. 2020 Jan 8;48(D1):D517-D525. doi: 10.1093/nar/gkz935.
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Population dynamics of an Escherichia coli ST131 lineage during recurrent urinary tract infection.大肠杆菌 ST131 株系在反复尿路感染期间的种群动态。
Nat Commun. 2019 Aug 13;10(1):3643. doi: 10.1038/s41467-019-11571-5.
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Extended-Spectrum β-Lactamase-Producing Enterobacteriaceae: Update on Molecular Epidemiology and Treatment Options.产超广谱β-内酰胺酶肠杆菌科细菌:分子流行病学和治疗选择的最新进展。
Drugs. 2019 Sep;79(14):1529-1541. doi: 10.1007/s40265-019-01180-3.
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NDM Metallo-β-Lactamases and Their Bacterial Producers in Health Care Settings.在医疗环境中 NDM 型金属β-内酰胺酶及其细菌生产者
Clin Microbiol Rev. 2019 Jan 30;32(2). doi: 10.1128/CMR.00115-18. Print 2019 Mar 20.
6
Prevalence of ST131 Clone Producing Both ESBL CTX-M-15 and AAC(6')Ib-cr Among Ciprofloxacin-Resistant Isolates from Yemen.也门环丙沙星耐药分离株中同时产生 ESBL CTX-M-15 和 AAC(6')Ib-cr 的 ST131 克隆的流行率。
Microb Drug Resist. 2018 Dec;24(10):1537-1542. doi: 10.1089/mdr.2018.0024. Epub 2018 Jun 8.
7
PointFinder: a novel web tool for WGS-based detection of antimicrobial resistance associated with chromosomal point mutations in bacterial pathogens.PointFinder:一种基于 WGS 的新型网络工具,用于检测细菌病原体中与染色体点突变相关的抗菌药物耐药性。
J Antimicrob Chemother. 2017 Oct 1;72(10):2764-2768. doi: 10.1093/jac/dkx217.
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Genome-Wide Discovery of Genes Required for Capsule Production by Uropathogenic .尿路致病性 产生荚膜所需基因的全基因组发现
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9
Impact of AAC(6')-Ib-cr in combination with chromosomal-mediated mechanisms on clinical quinolone resistance in Escherichia coli.AAC(6')-Ib-cr与染色体介导机制联合对大肠杆菌临床喹诺酮耐药性的影响
J Antimicrob Chemother. 2016 Nov;71(11):3066-3071. doi: 10.1093/jac/dkw258. Epub 2016 Jul 11.
10
Topoisomerase Inhibitors: Fluoroquinolone Mechanisms of Action and Resistance.拓扑异构酶抑制剂:氟喹诺酮类药物的作用机制与耐药性
Cold Spring Harb Perspect Med. 2016 Sep 1;6(9):a025320. doi: 10.1101/cshperspect.a025320.

质粒介导的环丙沙星耐药性赋予大肠杆菌 ST131 选择性优势。

Plasmid-Mediated Ciprofloxacin Resistance Imparts a Selective Advantage on Escherichia coli ST131.

机构信息

School of Chemistry and Molecular Biosciences, The University of Queenslandgrid.1003.2, Brisbane, Queensland, Australia.

Australian Infectious Diseases Research Centre, The University of Queenslandgrid.1003.2, Brisbane, Queensland, Australia.

出版信息

Antimicrob Agents Chemother. 2022 Jan 18;66(1):e0214621. doi: 10.1128/AAC.02146-21. Epub 2021 Nov 15.

DOI:10.1128/AAC.02146-21
PMID:34780264
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8765324/
Abstract

Escherichia coli ST131 is a recently emerged antibiotic resistant clone responsible for high rates of urinary tract and bloodstream infections. Despite its global dominance, the precise mechanisms that have driven the rapid dissemination of ST131 remain unknown. Here, we show that the plasmid-associated resistance gene encoding the AAC(6')-Ib-cr enzyme that inactivates the fluoroquinolone (FQ) antibiotic ciprofloxacin is present in >70% of strains from the most rapidly expanding subgroup of multidrug resistant ST131. Using a series of genome-edited and plasmid-cured isogenic strains, we demonstrate that the gene confers a selective advantage on ST131 in the presence of ciprofloxacin, even in strains containing chromosomal GyrA and ParC FQ-resistance mutations. Further, we identify a pattern of emerging carbapenem resistance in other common E. coli clones carrying both and chromosomal FQ-resistance mutations, suggesting this dual resistance combination may also impart a selective advantage on these non-ST131 antibiotic resistant lineages.

摘要

大肠杆菌 ST131 是一种新近出现的抗生素耐药克隆,可导致尿路感染和血流感染的高发病率。尽管它在全球占据主导地位,但推动 ST131 快速传播的确切机制仍不清楚。在这里,我们表明,携带编码使氟喹诺酮(FQ)抗生素环丙沙星失活的 AAC(6')-Ib-cr 酶的质粒相关耐药基因存在于耐药性 ST131 中快速扩张的亚群的>70%的菌株中。通过一系列基因组编辑和质粒消除的同基因株,我们证明即使在含有染色体 GyrA 和 ParC FQ 耐药突变的菌株中, 基因在环丙沙星存在下也赋予 ST131 选择性优势。此外,我们在携带 和染色体 FQ 耐药突变的其他常见大肠杆菌克隆中发现了一种新兴碳青霉烯耐药模式,表明这种双重耐药组合也可能赋予这些非 ST131 抗生素耐药谱系选择性优势。