Suppr超能文献

提供了治疗结核病的目标。

Structure of the ATP synthase from provides targets for treating tuberculosis.

机构信息

The Medical Research Council Mitochondrial Biology Unit, University of Cambridge, Cambridge CB2 0XY, United Kingdom.

The Medical Research Council Mitochondrial Biology Unit, University of Cambridge, Cambridge CB2 0XY, United Kingdom

出版信息

Proc Natl Acad Sci U S A. 2021 Nov 23;118(47). doi: 10.1073/pnas.2111899118.

Abstract

The structure has been determined by electron cryomicroscopy of the adenosine triphosphate (ATP) synthase from This analysis confirms features in a prior description of the structure of the enzyme, but it also describes other highly significant attributes not recognized before that are crucial for understanding the mechanism and regulation of the mycobacterial enzyme. First, we resolved not only the three main states in the catalytic cycle described before but also eight substates that portray structural and mechanistic changes occurring during a 360° catalytic cycle. Second, a mechanism of auto-inhibition of ATP hydrolysis involves not only the engagement of the C-terminal region of an α-subunit in a loop in the γ-subunit, as proposed before, but also a "fail-safe" mechanism involving the b'-subunit in the peripheral stalk that enhances engagement. A third unreported characteristic is that the fused bδ-subunit contains a duplicated domain in its N-terminal region where the two copies of the domain participate in similar modes of attachment of the two of three N-terminal regions of the α-subunits. The auto-inhibitory plus the associated "fail-safe" mechanisms and the modes of attachment of the α-subunits provide targets for development of innovative antitubercular drugs. The structure also provides support for an observation made in the bovine ATP synthase that the transmembrane proton-motive force that provides the energy to drive the rotary mechanism is delivered directly and tangentially to the rotor via a Grotthuss water chain in a polar L-shaped tunnel.

摘要

该结构已通过对三磷酸腺苷(ATP)合酶的电子冷冻显微镜分析确定。这项分析证实了先前对该酶结构描述的特征,但也描述了其他以前未被识别但对理解分枝杆菌酶的机制和调节至关重要的高度重要属性。首先,我们不仅解析了以前描述的催化循环中的三个主要状态,还解析了描绘在 360°催化循环中发生的结构和机制变化的八个亚状态。其次,ATP 水解的自动抑制机制不仅涉及先前提出的 C 端区域与γ-亚基环的结合,还涉及涉及外围茎中 b'-亚基的“故障安全”机制,从而增强了结合。第三个未报道的特征是,融合的 bδ-亚基在其 N 端区域包含一个重复的结构域,该结构域的两个副本以类似的方式参与三个α-亚基的两个 N 端区域的附着。自动抑制加上相关的“故障安全”机制以及α-亚基的附着方式为开发创新型抗结核药物提供了目标。该结构还为在牛 ATP 合酶中观察到的现象提供了支持,即提供驱动旋转机制的能量的跨膜质子动力直接且切线地通过极性 L 形隧道中的质子链传递给转子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1bb8/8617483/7390046df00c/pnas.202111899fig01.jpg

相似文献

1
Structure of the ATP synthase from provides targets for treating tuberculosis.
Proc Natl Acad Sci U S A. 2021 Nov 23;118(47). doi: 10.1073/pnas.2111899118.
2
Structure and function of Mycobacterium-specific components of F-ATP synthase subunits α and ε.
J Struct Biol. 2018 Dec;204(3):420-434. doi: 10.1016/j.jsb.2018.10.006. Epub 2018 Oct 17.
3
Structure and subunit arrangement of Mycobacterial FF ATP synthase and novel features of the unique mycobacterial subunit δ.
J Struct Biol. 2019 Aug 1;207(2):199-208. doi: 10.1016/j.jsb.2019.05.008. Epub 2019 May 24.
4
A systematic assessment of mycobacterial F -ATPase subunit ε's role in latent ATPase hydrolysis.
FEBS J. 2021 Feb;288(3):818-836. doi: 10.1111/febs.15440. Epub 2020 Jul 4.
5
Structure of mycobacterial ATP synthase bound to the tuberculosis drug bedaquiline.
Nature. 2021 Jan;589(7840):143-147. doi: 10.1038/s41586-020-3004-3. Epub 2020 Dec 9.
6
The structure of the catalytic domain of the ATP synthase from is a target for developing antitubercular drugs.
Proc Natl Acad Sci U S A. 2019 Mar 5;116(10):4206-4211. doi: 10.1073/pnas.1817615116. Epub 2019 Jan 25.
8
Probing the interaction of the diarylquinoline TMC207 with its target mycobacterial ATP synthase.
PLoS One. 2011;6(8):e23575. doi: 10.1371/journal.pone.0023575. Epub 2011 Aug 17.
9
Unique structural and mechanistic properties of mycobacterial F-ATP synthases: Implications for drug design.
Prog Biophys Mol Biol. 2020 May;152:64-73. doi: 10.1016/j.pbiomolbio.2019.11.006. Epub 2019 Nov 16.

引用本文的文献

1
Rotation-Direction-Dependent Mechanism of the Inhibitor Protein IF for Mitochondrial ATP Synthase from Atomistic Simulations.
JACS Au. 2025 May 27;5(6):2654-2665. doi: 10.1021/jacsau.5c00261. eCollection 2025 Jun 23.
2
F-ATP Synthase Inhibitors and Targets.
Antibiotics (Basel). 2024 Dec 3;13(12):1169. doi: 10.3390/antibiotics13121169.
3
Comparative Proteomic Analysis of Cell Wall Proteins of Aminoglycosides Resistant and Sensitive Clinical Isolates.
Curr Protein Pept Sci. 2025;26(5):392-405. doi: 10.2174/0113892037334796240927055243.
4
Exploring the Chemical Space of Mycobacterial Oxidative Phosphorylation Inhibitors Using Molecular Modeling.
ChemMedChem. 2024 Nov 18;19(22):e202400303. doi: 10.1002/cmdc.202400303. Epub 2024 Sep 20.
5
Inhibition of M. tuberculosis and human ATP synthase by BDQ and TBAJ-587.
Nature. 2024 Jul;631(8020):409-414. doi: 10.1038/s41586-024-07605-8. Epub 2024 Jul 3.
6
Blueprints for ATP machinery will aid tuberculosis drug design.
Nature. 2024 Jul;631(8020):278-280. doi: 10.1038/d41586-024-02094-1.
7
Molecular Modeling and Simulation of the Mycobacterial Cell Envelope: From Individual Components to Cell Envelope Assemblies.
J Phys Chem B. 2023 Dec 28;127(51):10941-10949. doi: 10.1021/acs.jpcb.3c06136. Epub 2023 Dec 13.
8
Spatial segregation and aging of metabolic processes underlie phenotypic heterogeneity in mycobacteria.
bioRxiv. 2023 Dec 2:2023.12.01.569614. doi: 10.1101/2023.12.01.569614.
9
Mechanism of mycobacterial ATP synthase inhibition by squaramides and second generation diarylquinolines.
EMBO J. 2023 Aug 1;42(15):e113687. doi: 10.15252/embj.2023113687. Epub 2023 Jun 28.

本文引用的文献

2
The Rise of Molecular Glues.
Cell. 2021 Jan 7;184(1):3-9. doi: 10.1016/j.cell.2020.12.020.
3
Structure of mycobacterial ATP synthase bound to the tuberculosis drug bedaquiline.
Nature. 2021 Jan;589(7840):143-147. doi: 10.1038/s41586-020-3004-3. Epub 2020 Dec 9.
4
Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V complex.
Sci Adv. 2020 Oct 7;6(41). doi: 10.1126/sciadv.abb9605. Print 2020 Oct.
5
Structure of the dimeric ATP synthase from bovine mitochondria.
Proc Natl Acad Sci U S A. 2020 Sep 22;117(38):23519-23526. doi: 10.1073/pnas.2013998117. Epub 2020 Sep 8.
6
Bedaquiline inhibits the yeast and human mitochondrial ATP synthases.
Commun Biol. 2020 Aug 19;3(1):452. doi: 10.1038/s42003-020-01173-z.
7
A systematic assessment of mycobacterial F -ATPase subunit ε's role in latent ATPase hydrolysis.
FEBS J. 2021 Feb;288(3):818-836. doi: 10.1111/febs.15440. Epub 2020 Jul 4.
8
Cryo-EM structures provide insight into how E. coli FF ATP synthase accommodates symmetry mismatch.
Nat Commun. 2020 May 26;11(1):2615. doi: 10.1038/s41467-020-16387-2.
10
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix.
Acta Crystallogr D Struct Biol. 2019 Oct 1;75(Pt 10):861-877. doi: 10.1107/S2059798319011471. Epub 2019 Oct 2.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验