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细胞的长宽比在深度学习中重要吗?用于多尺度细胞病理学细胞图像分类的深度学习方法的稳健比较:从卷积神经网络到视觉Transformer。

Is the aspect ratio of cells important in deep learning? A robust comparison of deep learning methods for multi-scale cytopathology cell image classification: From convolutional neural networks to visual transformers.

作者信息

Liu Wanli, Li Chen, Rahaman Md Mamunur, Jiang Tao, Sun Hongzan, Wu Xiangchen, Hu Weiming, Chen Haoyuan, Sun Changhao, Yao Yudong, Grzegorzek Marcin

机构信息

Microscopic Image and Medical Image Analysis Group, College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110169, China.

Microscopic Image and Medical Image Analysis Group, College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, 110169, China.

出版信息

Comput Biol Med. 2022 Feb;141:105026. doi: 10.1016/j.compbiomed.2021.105026. Epub 2021 Nov 11.

DOI:10.1016/j.compbiomed.2021.105026
PMID:34801245
Abstract

Cervical cancer is a very common and fatal type of cancer in women. Cytopathology images are often used to screen for this cancer. Given that there is a possibility that many errors can occur during manual screening, a computer-aided diagnosis system based on deep learning has been developed. Deep learning methods require a fixed dimension of input images, but the dimensions of clinical medical images are inconsistent. The aspect ratios of the images suffer while resizing them directly. Clinically, the aspect ratios of cells inside cytopathological images provide important information for doctors to diagnose cancer. Therefore, it is difficult to resize directly. However, many existing studies have resized the images directly and have obtained highly robust classification results. To determine a reasonable interpretation, we have conducted a series of comparative experiments. First, the raw data of the SIPaKMeD dataset are pre-processed to obtain standard and scaled datasets. Then, the datasets are resized to 224 × 224 pixels. Finally, 22 deep learning models are used to classify the standard and scaled datasets. The results of the study indicate that deep learning models are robust to changes in the aspect ratio of cells in cervical cytopathological images. This conclusion is also validated via the Herlev dataset.

摘要

宫颈癌是女性中一种非常常见且致命的癌症类型。细胞病理学图像常被用于筛查这种癌症。鉴于人工筛查过程中可能会出现许多错误,基于深度学习的计算机辅助诊断系统已被开发出来。深度学习方法要求输入图像具有固定尺寸,但临床医学图像的尺寸并不一致。直接调整图像大小时,图像的宽高比会受到影响。临床上,细胞病理学图像中细胞的宽高比为医生诊断癌症提供重要信息。因此,直接调整大小很困难。然而,许多现有研究直接对图像进行了调整大小,并获得了高度稳健的分类结果。为了确定一个合理的解释,我们进行了一系列对比实验。首先,对SIPaKMeD数据集的原始数据进行预处理,以获得标准且经过缩放的数据集。然后,将数据集调整为224×224像素。最后,使用22个深度学习模型对标准数据集和经过缩放的数据集进行分类。研究结果表明,深度学习模型对宫颈细胞病理学图像中细胞宽高比的变化具有稳健性。这一结论也通过赫勒夫数据集得到了验证。

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