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基于转录组的药用植物掌叶大黄性别分化激素调控机制分析

Transcriptome-based analysis of the hormone regulation mechanism of gender differentiation in Maxim.

作者信息

Qin Baiting, Lu Xiujun, Sun Xiaomei, Cui Jianguo, Deng Jifeng, Zhang Lijie

机构信息

College of Forestry, Shenyang Agricultural University, Shenyang, China.

Key Laboratory of Forest Tree Genetics, Breeding and Cultivation of Liaoning Province, Shenyang, China.

出版信息

PeerJ. 2021 Nov 9;9:e12328. doi: 10.7717/peerj.12328. eCollection 2021.

Abstract

Maxim is a hermaphroditic plant belonging to the genus in the family Juglandaceae. The pollination period of female flowers is different from the loose powder period of male flowers on the same tree. In several trees, female flowers bloom first, whereas in others, male flowers bloom first. In this study, male and female flower buds of at the physiological differentiation stage were used. Illumina-based transcriptome sequencing was performed, and the quality of the sequencing results was evaluated and analyzed. A total of 138,138 unigenes with an average length of 788 bp were obtained. There were 8,116 differentially expressed genes (DEGs); 2,840 genes were upregulated, and 5,276 genes were downregulated. The DEGs were classified by Gene Ontology and analyzed by Kyoto Encyclopedia of Genes and Genomes. The signal transduction factors involved in phytohormone synthesis were selected. The results displayed that ARF and SAUR were expressed differently in the auxin signaling pathway. Additionally, DELLA protein (a negative regulator of gibberellin), the cytokinin synthesis pathway, and A-ARR were downregulated. On April 2nd, the contents of IAA, GA, CTK, ETH and SA in male and female flower buds of two types of were opposite, and there were obvious genes regulating gender differentiation. Overall, we found that the sex differentiation of was related to various hormone signal transduction pathways, and hormone signal transduction plays a leading role in regulation.

摘要

马克西姆是胡桃科某属的一种雌雄同株植物。同一棵树上雌花的授粉期与雄花的散粉期不同。在几棵树上,雌花先开,而在其他树上,雄花先开。在本研究中,使用了处于生理分化阶段的马克西姆的雄花芽和雌花芽。进行了基于Illumina的转录组测序,并对测序结果的质量进行了评估和分析。共获得138138个单基因,平均长度为788 bp。有8116个差异表达基因(DEG);2840个基因上调,5276个基因下调。通过基因本体论对DEG进行分类,并通过京都基因与基因组百科全书进行分析。选择了参与植物激素合成的信号转导因子。结果显示,ARF和SAUR在生长素信号通路中的表达不同。此外,DELLA蛋白(赤霉素的负调节因子)、细胞分裂素合成途径和A-ARR均下调。4月2日,两种类型的马克西姆的雄花芽和雌花芽中IAA、GA、CTK、ETH和SA的含量相反,并且存在明显的调节性别分化的基因。总体而言,我们发现马克西姆的性别分化与各种激素信号转导途径有关,并且激素信号转导在调节中起主导作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd35/8588858/dc37916317d3/peerj-09-12328-g001.jpg

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