Patel Manish Kumar, Pandey Sonika, Kumar Manoj, Haque Md Intesaful, Pal Sikander, Yadav Narendra Singh
Department of Postharvest Science of Fresh Produce, Agricultural Research Organization, Volcani Center, Rishon LeZion 7505101, Israel.
Independent Researcher, Civil Line, Fathepur 212601, India.
Plants (Basel). 2021 Nov 8;10(11):2409. doi: 10.3390/plants10112409.
Metabolomics is now considered a wide-ranging, sensitive and practical approach to acquire useful information on the composition of a metabolite pool present in any organism, including plants. Investigating metabolomic regulation in plants is essential to understand their adaptation, acclimation and defense responses to environmental stresses through the production of numerous metabolites. Moreover, metabolomics can be easily applied for the phenotyping of plants; and thus, it has great potential to be used in genome editing programs to develop superior next-generation crops. This review describes the recent analytical tools and techniques available to study plants metabolome, along with their significance of sample preparation using targeted and non-targeted methods. Advanced analytical tools, like gas chromatography-mass spectrometry (GC-MS), liquid chromatography mass-spectroscopy (LC-MS), capillary electrophoresis-mass spectrometry (CE-MS), fourier transform ion cyclotron resonance-mass spectrometry (FTICR-MS) matrix-assisted laser desorption/ionization (MALDI), ion mobility spectrometry (IMS) and nuclear magnetic resonance (NMR) have speed up precise metabolic profiling in plants. Further, we provide a complete overview of bioinformatics tools and plant metabolome database that can be utilized to advance our knowledge to plant biology.
代谢组学如今被视为一种广泛、灵敏且实用的方法,用于获取有关包括植物在内的任何生物体中代谢物库组成的有用信息。研究植物中的代谢组调控对于通过众多代谢物的产生来理解它们对环境胁迫的适应、驯化和防御反应至关重要。此外,代谢组学可轻松应用于植物的表型分析;因此,它在基因组编辑计划中具有巨大潜力,可用于培育优良的下一代作物。本综述描述了目前可用于研究植物代谢组的分析工具和技术,以及使用靶向和非靶向方法进行样品制备的重要性。先进的分析工具,如气相色谱 - 质谱联用仪(GC-MS)、液相色谱 - 质谱联用仪(LC-MS)、毛细管电泳 - 质谱联用仪(CE-MS)、傅里叶变换离子回旋共振质谱仪(FTICR-MS)、基质辅助激光解吸/电离(MALDI)、离子淌度谱(IMS)和核磁共振(NMR),加快了植物中精确代谢谱分析的速度。此外,我们还全面概述了可用于增进我们对植物生物学认识的生物信息学工具和植物代谢组数据库。