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用于癌症诊断的微混合器生物芯片中阳离子脂质体纳米颗粒对细胞外囊泡RNA的超快速检测

Ultrafast Detection of Exosomal RNAs Cationic Lipoplex Nanoparticles in a Micromixer Biochip for Cancer Diagnosis.

作者信息

Yang Yunchen, Kannisto Eric, Patnaik Santosh K, Reid Mary E, Li Lei, Wu Yun

机构信息

Department of Biomedical Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States.

Department of Thoracic Surgery, Roswell Park Comprehensive Cancer Center, Buffalo, New York 14263, United States.

出版信息

ACS Appl Nano Mater. 2021 Mar 26;4(3):2806-2819. doi: 10.1021/acsanm.0c03426. Epub 2021 Mar 13.

Abstract

Exosomes are cell-derived, nanosized extracellular vesicles for intercellular communication. Exosomal RNAs have been shown as one type of promising cancer liquid biopsy biomarkers. Conventional methods to characterize exosomal RNAs such as quantitative reverse transcription polymerase chain reaction (qRT-PCR) are limited by low sensitivity, large sample consumption, time-consuming process, and high cost. Many technologies have been developed to overcome these challenges; however, many hours are still required to complete the assays, especially when exosome lysis and RNA extraction are required. We have developed a microfluidic cationic lipoplex nanoparticles (mCLN) assay that utilizes a micromixer biochip to allow for the effective capture of exosomes by cationic lipoplex nanoparticles and thus enables ultrafast and sensitive exosomal RNA detection for cancer diagnosis. The sensing performance and diagnostic performance of the mCLN assay were investigated using non-small cell lung cancer (NSCLC) as the disease model and exosomal microRNA-21 and TTF-1 mRNA as the biomarkers. The limits of detection of the mCLN assay were 2.06 × 10 and 3.71 × 10 exosomes/mL for microRNA-21 and TTF-1 mRNA, respectively, indicating that the mCLN assay may require as low as 1 L of serum for exosomal RNA detection. The mCLN assay successfully distinguished NSCLC from normal controls by detecting significantly higher microRNA-21 and TTF-1 mRNA levels in exosomes from both NSCLC patient serum samples and A549 NSCLC cells than those from normal controls and BEAS-2B normal bronchial epithelial cells. Compared with conventional qRT-PCR assay, the mCLN assay showed a higher diagnostic accuracy in lung cancer, required less sample volume (30 vs 100 L), and consumed much less time (10 min vs 4 h).

摘要

外泌体是细胞来源的纳米级细胞外囊泡,用于细胞间通讯。外泌体RNA已被证明是一类很有前景的癌症液体活检生物标志物。用于表征外泌体RNA的传统方法,如定量逆转录聚合酶链反应(qRT-PCR),存在灵敏度低、样本消耗量大、过程耗时且成本高的局限性。人们已开发出多种技术来克服这些挑战;然而,完成检测仍需要数小时,尤其是在需要进行外泌体裂解和RNA提取时。我们开发了一种微流控阳离子脂质体纳米颗粒(mCLN)检测方法,该方法利用微混合器生物芯片,使阳离子脂质体纳米颗粒能够有效捕获外泌体,从而实现用于癌症诊断的超快速、灵敏的外泌体RNA检测。以非小细胞肺癌(NSCLC)作为疾病模型,以外泌体微小RNA-21和甲状腺转录因子-1(TTF-1)mRNA作为生物标志物,研究了mCLN检测方法的传感性能和诊断性能。mCLN检测方法对微小RNA-21和TTF-1 mRNA的检测限分别为2.06×10和3.71×10个外泌体/毫升,这表明mCLN检测方法检测外泌体RNA可能只需低至1微升血清。通过检测NSCLC患者血清样本和A549 NSCLC细胞中外泌体中微小RNA-21和TTF-1 mRNA水平显著高于正常对照和BEAS-2B正常支气管上皮细胞,mCLN检测方法成功地将NSCLC与正常对照区分开来。与传统的qRT-PCR检测方法相比,mCLN检测方法在肺癌诊断中显示出更高的诊断准确性,所需样本量更少(30微升对100微升),耗时也少得多(10分钟对4小时)。

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Cancer Statistics, 2021.癌症统计数据,2021.
CA Cancer J Clin. 2021 Jan;71(1):7-33. doi: 10.3322/caac.21654. Epub 2021 Jan 12.
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Application of exosomes as liquid biopsy in clinical diagnosis.外泌体作为液体活检在临床诊断中的应用。
Signal Transduct Target Ther. 2020 Aug 3;5(1):144. doi: 10.1038/s41392-020-00258-9.
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Exosomes as a Multicomponent Biomarker Platform in Cancer.外泌体作为癌症多组分生物标志物平台。
Trends Cancer. 2020 Sep;6(9):767-774. doi: 10.1016/j.trecan.2020.03.007. Epub 2020 Apr 16.

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