Zhang Zhe, Tan Zilong, Lv Qiaoli, Wang Lichong, Yu Kai, Yang Huan, Liang Huaizhen, Lu Tianzhu, Ji Yulong, Chen Junjun, He Wei, Chen Zhen, Chen Shuhui, Shen Xiaoli
Department of Neurosurgery, The Second Affifiliated Hospital of Nanchang University, Nanchang, China.
Jiangxi Key Laboratory of Translational Cancer Research, Jiangxi Cancer Hospital, Nanchang, China.
Front Genet. 2021 Nov 22;12:710944. doi: 10.3389/fgene.2021.710944. eCollection 2021.
Glioma is the most common primary tumor of the central nervous system and is associated with poor overall survival, creating an urgent need to identify survival-associated biomarkers. C1ORF112, an alpha-helical protein, is overexpressed in some cancers; however, its prognostic role has not yet been explored in gliomas. Thus, in this study, we attempted to address this by determining the prognostic value and potential function of C1ORF112 in low-grade gliomas (LGGs). The expression of C1ORF112 in normal and tumor tissues was analyzed using data from The Cancer Genome Atlas (TCGA), Chinese Glioma Genome Atlas (CGGA), Oncomine, and Rembrandt databases. The genetic changes of C1ORF112 in LGG were analyzed using cBioPortal. Survival analysis was used to evaluate the relationship between C1ORF112 expression and survival in patients with LGG. Correlation between immune infiltration and C1ORF112 expression was determined using Timer software. Additionally, data from three online platforms were integrated to identify the co-expressed genes of C1ORF112. The potential biological functions of C1ORF112 were investigated by enrichment analysis. C1ORF112 mRNA was highly expressed in LGGs ( < 0.01). Area under the ROC curve (AUC) showed that the expression of C1ORF112 in LGG was 0.673 (95% confidence interval [CI] = 0.618-0.728). Kaplan-Meier survival analysis showed that patients with high C1ORF112 expression had lower OS than patients with low C1ORF112 expression ( < 0.05). Multivariate analysis showed that high expression of C1ORF112 was an independent prognostic factor for the overall survival in patients from TCGA and CGGA databases. C1ORF112 expression was positively correlated with six immunoinfiltrating cells (all < 0.001). The enrichment analysis suggested the enrichment of C1ORF112 and co-expressed genes in cell cycle and DNA replication. This study suggested that C1ORF112 may be a prognostic biomarker and a potential immunotherapeutic target for LGG.
胶质瘤是中枢神经系统最常见的原发性肿瘤,与总体生存率低相关,因此迫切需要识别与生存相关的生物标志物。C1ORF112是一种α螺旋蛋白,在某些癌症中过表达;然而,其在胶质瘤中的预后作用尚未得到探索。因此,在本研究中,我们试图通过确定C1ORF112在低级别胶质瘤(LGG)中的预后价值和潜在功能来解决这一问题。使用来自癌症基因组图谱(TCGA)、中国胶质瘤基因组图谱(CGGA)、Oncomine和Rembrandt数据库的数据,分析C1ORF112在正常组织和肿瘤组织中的表达。使用cBioPortal分析LGG中C1ORF112的基因变化。生存分析用于评估C1ORF112表达与LGG患者生存之间的关系。使用Timer软件确定免疫浸润与C1ORF112表达之间的相关性。此外,整合来自三个在线平台的数据以识别C1ORF112共表达基因。通过富集分析研究C1ORF112的潜在生物学功能。C1ORF112 mRNA在LGG中高表达(<0.01)。ROC曲线下面积(AUC)显示,C1ORF112在LGG中的表达为0.673(95%置信区间[CI]=0.618 - 0.728)。Kaplan-Meier生存分析显示,C1ORF112高表达患者的总生存期低于C1ORF112低表达患者(<0.05)。多变量分析显示,C1ORF112高表达是来自TCGA和CGGA数据库患者总生存的独立预后因素。C1ORF112表达与六种免疫浸润细胞呈正相关(均<0.001)。富集分析表明C1ORF112及其共表达基因在细胞周期和DNA复制中富集。本研究表明,C1ORF112可能是LGG的一种预后生物标志物和潜在的免疫治疗靶点。