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BesC 通过底物触发的和反应性的双核过氧中间物引发 C-C 键断裂。

BesC Initiates C-C Cleavage through a Substrate-Triggered and Reactive Diferric-Peroxo Intermediate.

机构信息

Department of Molecular and Structural Biochemistry, North Carolina State University, Raleigh, North Carolina 27695, United States.

Department of Chemistry, North Carolina State University, Raleigh, North Carolina 27695, United States.

出版信息

J Am Chem Soc. 2021 Dec 22;143(50):21416-21424. doi: 10.1021/jacs.1c11109. Epub 2021 Dec 13.

Abstract

BesC catalyzes the iron- and O-dependent cleavage of 4-chloro-l-lysine to form 4-chloro-l-allylglycine, formaldehyde, and ammonia. This process is a critical step for a biosynthetic pathway that generates a terminal alkyne amino acid which can be leveraged as a useful bio-orthogonal handle for protein labeling. As a member of an emerging family of diiron enzymes that are typified by their heme oxygenase-like fold and a very similar set of coordinating ligands, recently termed HDOs, BesC performs an unusual type of carbon-carbon cleavage reaction that is a significant departure from reactions catalyzed by canonical dinuclear-iron enzymes. Here, we show that BesC activates O in a substrate-gated manner to generate a diferric-peroxo intermediate. Examination of the reactivity of the peroxo intermediate with a series of lysine derivatives demonstrates that BesC initiates this unique reaction trajectory via cleavage of the C4-H bond; this process represents the rate-limiting step in a single turnover reaction. The observed reactivity of BesC represents the first example of a dinuclear-iron enzyme that utilizes a diferric-peroxo intermediate to capably cleave a C-H bond as part of its native function, thus circumventing the formation of a high-valent intermediate more commonly associated with substrate monooxygenations.

摘要

BesC 催化铁和 O 依赖性裂解 4-氯-l-赖氨酸形成 4-氯-l-丙烯基甘氨酸、甲醛和氨。这个过程是一种生物合成途径的关键步骤,该途径产生末端炔基氨基酸,可作为蛋白质标记的有用生物正交处理。作为新兴的二铁酶家族的成员,BesC 具有类似于血红素加氧酶的折叠和非常相似的配位配体,最近被称为 HDOs,它执行一种不寻常的碳-碳裂解反应,与典型的双核铁酶催化的反应有很大的不同。在这里,我们表明 BesC 以底物门控的方式激活 O,以生成双核过氧中间体。用一系列赖氨酸衍生物研究过氧中间体的反应性表明,BesC 通过 C4-H 键的裂解启动这种独特的反应轨迹;这个过程代表了单次周转反应的限速步骤。BesC 的观察到的反应性代表了第一个利用双核过氧中间体来有效地切割 C-H 键的双核铁酶的例子,这是其天然功能的一部分,从而避免了通常与底物单加氧作用相关的高价中间体的形成。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ccb4/8876372/e2ada97817ea/nihms-1778712-f0002.jpg

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