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基于18S核糖体DNA的聚合酶链反应检测用于肉制品中禽类和哺乳动物DNA的鉴定

18S ribosomal DNA-based PCR test for avian and mammalian DNA identification in meat products.

作者信息

Zyrianova Irina M, Zaripov Oleg G

机构信息

Institute for Innovative Biotechnologies in Animal Husbandry, The branch of L.K. Ernst Federal Research Center for Animal Husbandry, 12/4 Kostyakov Street, Moscow, 127422, Russian Federation.

L.K. Ernst Federal Research Center for Animal Husbandry, Dubrovitsy, 60, Podolsk district, Moscow region, 142132, Russian Federation.

出版信息

Vet Anim Sci. 2022 Jan 20;15:100234. doi: 10.1016/j.vas.2022.100234. eCollection 2022 Mar.

Abstract

This work has aimed to create a PCR test to identify avian and mammalian DNA in meat products. The test is based on phylogenetic analysis of 18S ribosomal RNA (rRNA) of four major groups of : , , and  18S rDNA complete coding sequences from GenBank have been used for phylogenetic analysis by the Maximum Likelihood method. The alignment of these 18S rDNA sequences has been used for PCR primers modeling. We have received the following PCR fragment for these primers: for birds - 97 base pairs (bp), and for mammals - 134 bp. The difference between them in 37 bp is sufficient for separating these fragments in standard agarose gel. We have tested this PCR to identify avian or mammalian DNA in sausage products and confirmed the suitability of this test for avian (chicken) and mammalian (sheep, cows) meat identification and meat identification in sausage products.

摘要

这项工作旨在创建一种聚合酶链式反应(PCR)检测方法,以识别肉类产品中的禽类和哺乳动物DNA。该检测基于对四个主要类群的18S核糖体RNA(rRNA)进行系统发育分析: , ,以及 。已使用来自GenBank的18S rDNA完整编码序列,通过最大似然法进行系统发育分析。这些18S rDNA序列的比对已用于PCR引物建模。我们针对这些引物获得了以下PCR片段:对于鸟类 - 97个碱基对(bp),对于哺乳动物 - 134 bp。它们之间37 bp的差异足以在标准琼脂糖凝胶中分离这些片段。我们已经测试了这种PCR方法,以识别香肠产品中的禽类或哺乳动物DNA,并证实了该检测方法适用于禽类(鸡肉)和哺乳动物(绵羊、牛)肉的识别以及香肠产品中的肉类识别。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03db/8790660/14fa4143e0f9/ga1.jpg

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