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利用多个基因对工业废水中分离出的真菌进行特征描述和系统发育分析。

Characterization and phylogeny of fungi isolated from industrial wastewater using multiple genes.

机构信息

Department of Microbiology, Ahmadu Bello University, Zaria, Nigeria.

Department of Botany, Ahmadu Bello University, Zaria, Nigeria.

出版信息

Sci Rep. 2022 Feb 8;12(1):2094. doi: 10.1038/s41598-022-05820-9.

Abstract

The aim of this study was the isolation and molecular characterization of fungi from untreated refinery effluent by using multiple conserved genes. The Fungi isolated were characterized based on PCR amplification and genomic sequencing of the internal transcribed spacer region (ITS), partial β-tubulin (BenA), calmodulin (CaM), and RNA polymerase second large subunit (RPB2) genes, along with morphological characterization. The obtained sequences were subjected to BLAST analysis and the corresponding fungal isolates were assigned species names after comparison with representative sequences available in GenBank. Fifteen (15) Fungi species belonging to four genera of Aspergillus, Penicillium, Fusarium, and Trichoderma with Aspergillus as the predominant genus were identified. Therefore these genes should be used as molecular markers for species level identification of fungi (especially Aspergillus and Penicillium as proven in this study.

摘要

本研究的目的是通过使用多个保守基因从未经处理的炼油厂废水中分离和分子鉴定真菌。根据内部转录间隔区(ITS)、部分β-微管蛋白(BenA)、钙调蛋白(CaM)和 RNA 聚合酶第二大亚基(RPB2)基因的 PCR 扩增和基因组测序,以及形态学特征对分离出的真菌进行了鉴定。所得序列进行 BLAST 分析,并与 GenBank 中可用的代表序列进行比较,为相应的真菌分离株分配种名。鉴定出属于曲霉属、青霉属、镰刀菌属和木霉属四个属的 15 种真菌,其中曲霉属为主要属。因此,这些基因应该作为真菌(特别是在本研究中证明的曲霉属和青霉属)种水平鉴定的分子标记。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dfbd/8827091/ac3225113335/41598_2022_5820_Fig1_HTML.jpg

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