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《贝克酵母的生态与进化》

The Ecology and Evolution of the Baker's Yeast .

机构信息

State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Chaoyang District, Beijing 100101, China.

College of Life Sciences, University of Chinese Academy of Sciences, Shijingshan District, Beijing 100049, China.

出版信息

Genes (Basel). 2022 Jan 26;13(2):230. doi: 10.3390/genes13020230.

DOI:10.3390/genes13020230
PMID:35205274
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8871604/
Abstract

The baker's yeast has become a powerful model in ecology and evolutionary biology. A global effort on field survey and population genetics and genomics of in past decades has shown that the yeast distributes ubiquitously in nature with clearly structured populations. The global genetic diversity of is mainly contributed by strains from Far East Asia, and the ancient basal lineages of the species have been found only in China, supporting an 'out-of-China' origin hypothesis. The wild and domesticated populations are clearly separated in phylogeny and exhibit hallmark differences in sexuality, heterozygosity, gene copy number variation (CNV), horizontal gene transfer (HGT) and introgression events, and maltose utilization ability. The domesticated strains from different niches generally form distinct lineages and harbor lineage-specific CNVs, HGTs and introgressions, which contribute to their adaptations to specific fermentation environments. However, whether the domesticated lineages originated from a single, or multiple domestication events is still hotly debated and the mechanism causing the diversification of the wild lineages remains to be illuminated. Further worldwide investigations on both wild and domesticated , especially in Africa and West Asia, will be helpful for a better understanding of the natural and domestication histories and evolution of .

摘要

啤酒酵母已成为生态学和进化生物学的有力模式生物。过去几十年中,全球范围内对 的实地调查、种群遗传学和基因组学的研究表明,该酵母在自然界中广泛分布,种群结构清晰。 的全球遗传多样性主要由来自东亚的菌株贡献,而该物种的古老基础谱系仅在中国发现,支持“起源于中国”的假说。野生和驯化种群在系统发育上明显分离,并表现出性、杂合性、基因拷贝数变异(CNV)、水平基因转移(HGT)和渐渗事件以及麦芽糖利用能力方面的显著差异。来自不同生态位的驯化菌株通常形成独特的谱系,并具有谱系特异性的 CNV、HGT 和渐渗,这有助于它们适应特定的发酵环境。然而,驯化谱系是否起源于单一或多次驯化事件仍存在争议,野生谱系多样化的机制仍有待阐明。进一步在全球范围内对野生和驯化 的研究,特别是在非洲和西亚,将有助于更好地了解 的自然和驯化历史以及进化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/44841cbd38e9/genes-13-00230-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/37fe439ffc09/genes-13-00230-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/f11b26375496/genes-13-00230-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/3254f28551b6/genes-13-00230-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/a2d69a973db8/genes-13-00230-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/320308f8596b/genes-13-00230-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/44841cbd38e9/genes-13-00230-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/37fe439ffc09/genes-13-00230-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/f11b26375496/genes-13-00230-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/3254f28551b6/genes-13-00230-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/a2d69a973db8/genes-13-00230-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/320308f8596b/genes-13-00230-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2167/8871604/44841cbd38e9/genes-13-00230-g006.jpg

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