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TET1 的 N 端结构域促进了致密染色质区域的形成,这些区域对转录具有抗性。

The N-terminal domain of TET1 promotes the formation of dense chromatin regions refractory to transcription.

机构信息

Univ Rennes, CNRS, IGDR (Institut de Génétique et Développement de Rennes) - UMR 6290, BIOSIT (Biologie, Santé, Innovation Technologique de Rennes) - UMS 3480, US 018, 35000, Rennes, France.

Institut de Biologie François Jacob, Institute of Cellular and Molecular Radiobiology, Université Paris-Saclay, Université de Paris, CEA, 92265, Fontenay-aux-Roses, France.

出版信息

Chromosoma. 2022 Jun;131(1-2):47-58. doi: 10.1007/s00412-022-00769-0. Epub 2022 Mar 2.

Abstract

TET (ten-eleven translocation) enzymes initiate active cytosine demethylation via the oxidation of 5-methylcytosine. TET1 is composed of a C-terminal domain, which bears the catalytic activity of the enzyme, and a N-terminal region that is less well characterized except for the CXXC domain responsible for the targeting to CpG islands. While cytosine demethylation induced by TET1 promotes transcription, this protein also interacts with chromatin-regulating factors that rather silence this process, the coordination between these two opposite functions of TET1 being unclear. In the present work, we uncover a new function of the N-terminal part of the TET1 protein in the regulation of the chromatin architecture. This domain of the protein promotes the establishment of a compact chromatin architecture displaying reduced exchange rate of core histones and partial dissociation of the histone linker. This chromatin reorganization process, which does not rely on the CXXC domain, is associated with a global shutdown of transcription and an increase in heterochromatin-associated histone epigenetic marks. Based on these findings, we propose that the dense chromatin organization generated by the N-terminal domain of TET1 could contribute to restraining the transcription enhancement induced by the DNA demethylation activity of this enzyme.

摘要

TET(ten-eleven translocation)酶通过氧化 5-甲基胞嘧啶启动活性胞嘧啶去甲基化。TET1 由一个 C 端结构域组成,该结构域具有酶的催化活性,以及一个 N 端区域,该区域的特征除了负责靶向 CpG 岛的CXXC 结构域外,描述较少。虽然 TET1 诱导的胞嘧啶去甲基化促进转录,但该蛋白也与染色质调节因子相互作用,反而使该过程沉默,TET1 的这两种相反功能之间的协调尚不清楚。在本工作中,我们揭示了 TET1 蛋白 N 端在调控染色质结构方面的一个新功能。该蛋白的这一结构域促进了紧凑染色质结构的建立,表现为核心组蛋白的交换率降低和组蛋白连接子的部分解离。这种不依赖于 CXXC 结构域的染色质重排过程与转录的全局关闭以及与异染色质相关的组蛋白表观遗传标记的增加相关。基于这些发现,我们提出 TET1 的 N 端结构域产生的致密染色质组织可能有助于抑制该酶的 DNA 去甲基化活性诱导的转录增强。

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