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注释之间的空间:翻译沉默核糖体的新兴作用。

The space between notes: emerging roles for translationally silent ribosomes.

机构信息

The University of Texas at Dallas, Department of Biological Sciences, Richardson, TX, USA.

University of California, Santa Cruz, Department of Chemistry and Biochemistry, Santa Cruz, CA, USA.

出版信息

Trends Biochem Sci. 2022 Jun;47(6):477-491. doi: 10.1016/j.tibs.2022.02.003. Epub 2022 Mar 1.

DOI:10.1016/j.tibs.2022.02.003
PMID:35246374
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9106873/
Abstract

In addition to their central functions in translation, ribosomes can adopt inactive structures that are fully assembled yet devoid of mRNA. We describe how the abundance of idle eukaryotic ribosomes is influenced by a broad range of biological conditions spanning viral infection, nutrient deprivation, and developmental cues. Vacant ribosomes may provide a means to exclude ribosomes from translation while also shielding them from degradation, and the variable identity of factors that occlude ribosomes may impart distinct functionality. We propose that regulated changes in the balance of idle and active ribosomes provides a means to fine-tune translation. We provide an overview of idle ribosomes, describe what is known regarding their function, and highlight questions that may clarify their biological roles.

摘要

除了在翻译中的核心功能外,核糖体还可以采用完全组装但没有 mRNA 的非活性结构。我们描述了大量的空闲真核核糖体如何受到广泛的生物条件的影响,包括病毒感染、营养缺乏和发育线索。空载核糖体可能为核糖体从翻译中排除提供了一种手段,同时也保护它们免受降解,而封闭核糖体的因素的可变身份可能赋予它们不同的功能。我们提出,空闲核糖体和活性核糖体之间平衡的调节变化提供了一种微调翻译的方法。我们提供了对空载核糖体的概述,描述了已知的关于它们的功能,并强调了可能阐明它们的生物学作用的问题。

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本文引用的文献

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A molecular network of conserved factors keeps ribosomes dormant in the egg.一个保守因子的分子网络使卵中的核糖体处于休眠状态。
Nature. 2023 Jan;613(7945):712-720. doi: 10.1038/s41586-022-05623-y. Epub 2023 Jan 18.
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Adaptation to genome decay in the structure of the smallest eukaryotic ribosome.最小真核核糖体结构中对基因组退化的适应。
Nat Commun. 2022 Feb 1;13(1):591. doi: 10.1038/s41467-022-28281-0.
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A genetically-encoded crosslinker screen identifies SERBP1 as a PKCε substrate influencing translation and cell division.
真核生物延伸因子2激酶(eEF2K)通过对脑源性神经营养因子(BDNF)的翻译控制来调节疼痛。
Mol Cell. 2025 Feb 20;85(4):756-769.e5. doi: 10.1016/j.molcel.2024.11.023. Epub 2024 Dec 17.
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Hibernating ribosomes as drug targets?将处于休眠状态的核糖体作为药物靶点?
Front Microbiol. 2024 Jul 29;15:1436579. doi: 10.3389/fmicb.2024.1436579. eCollection 2024.
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Staphylococcal exoribonuclease YhaM destabilizes ribosomes by targeting the mRNA of a hibernation factor.葡萄球菌核酸外切酶 YhaM 通过靶向冬眠因子的 mRNA 来破坏核糖体。
Nucleic Acids Res. 2024 Aug 27;52(15):8998-9013. doi: 10.1093/nar/gkae596.
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Implication of Stm1 in the protection of eIF5A, eEF2 and tRNA through dormant ribosomes.Stm1通过休眠核糖体对真核起始因子5A、真核延伸因子2和转运RNA的保护作用。
Front Mol Biosci. 2024 Apr 18;11:1395220. doi: 10.3389/fmolb.2024.1395220. eCollection 2024.
7
Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation.人类肿瘤抑制因子PDCD4直接与核糖体相互作用以抑制翻译。
Cell Res. 2024 Jul;34(7):522-525. doi: 10.1038/s41422-024-00962-z. Epub 2024 Apr 19.
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Proc Natl Acad Sci U S A. 2024 Feb 13;121(7):e2306993121. doi: 10.1073/pnas.2306993121. Epub 2024 Feb 5.
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Nat Microbiol. 2023 Oct;8(10):1834-1845. doi: 10.1038/s41564-023-01469-w. Epub 2023 Sep 14.
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Bidirectional sequestration between a bacterial hibernation factor and a glutamate metabolizing protein.细菌休眠因子与谷氨酸代谢蛋白之间的双向隔离。
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一项遗传编码交联筛选发现 SERBP1 是 PKCε 的底物,影响翻译和细胞分裂。
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