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尿素的光控释放可通过低温傅里叶变换红外光谱法检测尿素-脲酶中间体。

Photocontrolled Release of Urea Enables the Detection of Urea-Urease Intermediates by Cryo-FTIR.

作者信息

Netto Caterina G C Marques, Bell Sarah, Castro Caio B, Machado Pedro Henrique, Purohit Vatsal, Davis Katherine M, Batista Ana Paula L, Dyer R Brian

机构信息

Departamento de Quimica, Universidade Federal de São Carlos, Rod. Washington Luiz, Km 235, s/n, São Carlos, SP, 13565-905, Brazil.

Department of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, GA, 30030, USA.

出版信息

Angew Chem Int Ed Engl. 2025 Sep 1;64(36):e202504332. doi: 10.1002/anie.202504332. Epub 2025 Jul 25.

DOI:10.1002/anie.202504332
PMID:40209042
Abstract

Caged compounds are a valuable tool to photocontrol the release of enzymatic substrates in a reaction. For example, caged urea molecules were proposed to control urea delivery to urease reactions and aid the determination of the catalytic mechanism of this enzyme. Owing to the success of several caged compounds based on ruthenium complexes, we synthesized a new inorganic caged urea (RuBpy-urea) and monitored the release of free urea by infrared spectroscopy upon irradiation. Transient infrared absorption (TRIR) indicates diffusion-controlled release of urea, and kinetics studies after photolysis demonstrate the functionality of the new caged molecule for photocontrolled delivery of urea to urease. Coupling photocontrolled delivery of urea to cryo-FTIR (fourier transform infrared spectroscopy) revealed that inhibition of urease results in different FTIR spectrum than the one observed for the noninhibited urease.

摘要

笼形化合物是光控反应中酶底物释放的一种有价值的工具。例如,有人提出用笼形尿素分子来控制尿素向脲酶反应的递送,并有助于确定该酶的催化机制。由于几种基于钌配合物的笼形化合物取得了成功,我们合成了一种新型无机笼形尿素(RuBpy-尿素),并通过辐照后的红外光谱监测游离尿素的释放。瞬态红外吸收(TRIR)表明尿素的释放受扩散控制,光解后的动力学研究证明了这种新型笼形分子用于光控尿素向脲酶递送的功能。将尿素的光控递送与低温傅里叶变换红外光谱(cryo-FTIR)相结合,发现脲酶的抑制导致的傅里叶变换红外光谱与未抑制的脲酶所观察到的不同。

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本文引用的文献

1
Urea Decomposition Mechanism by Dinuclear Nickel Complexes.双核镍配合物的尿素分解机理。
Molecules. 2023 Feb 9;28(4):1659. doi: 10.3390/molecules28041659.
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Iron-Containing Ureases.含铁脲酶
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Infrared spectra of amorphous and crystalline urea ices.无定形和结晶尿素冰的红外光谱。
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Microsecond timescale MD simulations at the transition state of HMGR predict remote allosteric residues.在3-羟基-3-甲基戊二酰辅酶A还原酶(HMGR)过渡态的微秒级时间尺度分子动力学(MD)模拟预测了远程变构残基。
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LH1-RC light-harvesting photocycle under realistic light-matter conditions.在现实的光物质条件下 LH1-RC 的光收集光循环。
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Infrared Difference Spectroscopy of Proteins: From Bands to Bonds.蛋白质的红外差谱学:从谱带到键。
Chem Rev. 2020 Apr 8;120(7):3466-3576. doi: 10.1021/acs.chemrev.9b00449. Epub 2020 Mar 23.