Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States.
J Nat Prod. 2022 Apr 22;85(4):980-986. doi: 10.1021/acs.jnatprod.1c01117. Epub 2022 Mar 9.
A new manumycin-type natural product named pacificamide () and its candidate biosynthetic gene cluster () were discovered from the marine actinobacterium CNT-855. The structure of the compound was determined using NMR, electronic circular dichroism, and bioinformatic predictions. The gene cluster is unique to and found in only two of the 119 genomes analyzed across nine species. Comparative analyses of biosynthetic gene clusters encoding the production of related manumycin-type compounds revealed genetic differences in accordance with the unique pacificamide structure. Further queries of manumycin-type gene clusters from public databases revealed their limited distribution across the phylum Actinobacteria and orphan diversity that suggests additional products remain to be discovered in this compound class. Production of the known metabolite triacsin D is also reported for the first time from the genus . This study adds two classes of compounds to the natural product collective isolated from the genus , which has proven to be a useful model for natural product research.
从海洋放线菌 CNT-855 中发现了一种新型的曼奴霉素型天然产物,名为 pacificamide(),及其候选生物合成基因簇()。该化合物的结构通过 NMR、电子圆二色性和生物信息学预测确定。基因簇是 所独有的,在分析的 9 个物种的 119 个基因组中仅发现了两个。与生产相关的曼奴霉素型化合物的生物合成基因簇的比较分析表明,结构的独特性导致了遗传差异。对公共数据库中曼奴霉素型基因簇的进一步查询表明,它们在放线菌门中的分布有限,孤儿多样性表明该化合物类别的其他产物有待发现。首次从属中报道了已知代谢产物三乙酰精氨酸 D 的产生。这项研究为从该属中分离出的天然产物总集体增加了两类化合物,该属已被证明是天然产物研究的有用模型。