索科特拉岛黄瓜（Dendrosicyos socotranus）和博氏珊瑚果（Corallocarpus boehmii）的叶绿体基因组比较数据分析
Comparative plastome data analysis of Dendrosicyos socotranus and Corallocarpus boehmii.
作者信息
Ali Mohammad Ajmal, Al-Anazi Khalid Mashay, Al-Hemaid Fahad, Ansari Waquar Akhtar, Lee Joongku
机构信息
Department of Botany and Microbiology, College of Science, King Saud University, Riyadh-11451, Saudi Arabia.
Genetics Laboratory,Department of Zoology, College of Science, King Saud University, Riyadh-11451, Saudi Arabia.
出版信息
Bioinformation. 2021 Jul 31;17(7):662-666. doi: 10.6026/97320630017662. eCollection 2021.
Comparison of the Dendrosicyos socotranus and Corallocarpus boehmii (tribe Coniandreae, family Cucurbitaceae) plastome data was of interest. Data on RNA, tRNA, GC%, plastome size, CDS and pseudogene were tabulated for the two species. The total length of 1,57,380 bp and 1,58,744 bp which includes LSC, SSC, IRa, and IRb, while their GC content was 37.1% and 37% respectively. The variation in the length of genes e.g. ndhD, ndhI, rpl22, rpoC2, rps16, rps19, rps8, ycf1and ycf2 noted. Data help to document the genetic differences between usual (climber) with those of tree cucurbits.
对索科特拉岛黄瓜（Dendrosicyos socotranus）和博姆氏珊瑚果（Corallocarpus boehmii）（葫芦科Coniandreae族）的质体基因组数据进行比较很有意义。列出了这两个物种的RNA、tRNA、GC%、质体基因组大小、编码序列（CDS）和假基因的数据。其总长度分别为157380 bp和158744 bp，包括大单拷贝区（LSC）、小单拷贝区（SSC）、反向重复序列a（IRa）和反向重复序列b（IRb），而它们的GC含量分别为37.1%和37%。注意到基因长度的变化，例如ndhD、ndhI、rpl22、rpoC2、rps16、rps19、rps8、ycf1和ycf2。这些数据有助于记录普通（攀缘植物）葫芦与树生葫芦之间的遗传差异。
Zotero 插件