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分析拟南芥植物在干旱胁迫下的代谢动态。

Analysis of metabolic dynamics during drought stress in Arabidopsis plants.

机构信息

Department of Molecular Genetics, Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, Campus UAB (Cerdanyola del Vallès), 08193, Barcelona, Spain.

Vetgenomics, Campus UAB - Cerdanyola del Vallès, Barcelona, 08193, Spain.

出版信息

Sci Data. 2022 Mar 21;9(1):90. doi: 10.1038/s41597-022-01161-4.

DOI:10.1038/s41597-022-01161-4
PMID:35314705
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8938536/
Abstract

Drought is a major cause of agricultural losses worldwide. Climate change will intensify drought episodes threatening agricultural sustainability. Gaining insights into drought response mechanisms is vital for crop adaptation to climate emergency. To date, only few studies report comprehensive analyses of plant metabolic adaptation to drought. Here, we present a multifactorial metabolomic study of early-mid drought stages in the model plant Arabidopsis thaliana. We sampled root and shoot tissues of plants subjected to water withholding over a six-day time course, including brassinosteroids receptor mutants previously reported to show drought tolerance phenotypes. Furthermore, we sequenced the root transcriptome at basal and after 5 days drought, allowing direct correlation between metabolic and transcriptomic changes and the multi-omics integration. Significant abiotic stress signatures were already activated at basal conditions in a vascular-specific receptor overexpression (BRL3ox). These were also rapidly mobilized under drought, revealing a systemic adaptation strategy driven from inner tissues of the plant. Overall, this dataset provides a significant asset to study drought metabolic adaptation and allows its analysis from multiple perspectives.

摘要

干旱是全球农业损失的主要原因。气候变化将加剧威胁农业可持续性的干旱事件。深入了解干旱响应机制对于作物适应气候紧急情况至关重要。迄今为止,只有少数研究报告了对植物代谢适应干旱的综合分析。在这里,我们对模式植物拟南芥的早中期干旱阶段进行了多因素代谢组学研究。我们采集了经过六天水分胁迫处理的植物的根和茎组织,包括先前报道具有耐旱表型的油菜素内酯受体突变体。此外,我们在干旱前和干旱后 5 天对根转录组进行了测序,允许代谢和转录组变化之间的直接相关性以及多组学整合。在血管特异性受体过表达(BRL3ox)中,即使在基础条件下,也已经激活了显著的非生物胁迫特征。这些特征在干旱下也迅速被调动,揭示了一种由植物内部组织驱动的系统适应策略。总的来说,这个数据集为研究干旱代谢适应提供了重要的资源,并允许从多个角度对其进行分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/e2353a8fe1c3/41597_2022_1161_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/8a972a2626b0/41597_2022_1161_Fig1_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/264c22c3ce2f/41597_2022_1161_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/e2353a8fe1c3/41597_2022_1161_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/8a972a2626b0/41597_2022_1161_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/b1ce60f7866a/41597_2022_1161_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/50a0343940bb/41597_2022_1161_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/264c22c3ce2f/41597_2022_1161_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5114/8938536/e2353a8fe1c3/41597_2022_1161_Fig5_HTML.jpg

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