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通量组学——监测代谢途径的新代谢组学方法

Fluxomics - New Metabolomics Approaches to Monitor Metabolic Pathways.

作者信息

Emwas Abdul-Hamid, Szczepski Kacper, Al-Younis Inas, Lachowicz Joanna Izabela, Jaremko Mariusz

机构信息

King Abdullah University of Science and Technology, Core Labs, Thuwal, Saudi Arabia.

Smart-Health Initiative (SHI) and Red Sea Research Center (RSRC), Biological and Environmental Sciences & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.

出版信息

Front Pharmacol. 2022 Mar 21;13:805782. doi: 10.3389/fphar.2022.805782. eCollection 2022.

Abstract

Fluxomics is an innovative -omics research field that measures the rates of all intracellular fluxes in the central metabolism of biological systems. Fluxomics gathers data from multiple different -omics fields, portraying the whole picture of molecular interactions. Recently, fluxomics has become one of the most relevant approaches to investigate metabolic phenotypes. Metabolic flux using C-labeled molecules is increasingly used to monitor metabolic pathways, to probe the corresponding gene-RNA and protein-metabolite interaction networks in actual time. Thus, fluxomics reveals the functioning of multi-molecular metabolic pathways and is increasingly applied in biotechnology and pharmacology. Here, we describe the main fluxomics approaches and experimental platforms. Moreover, we summarize recent fluxomic results in different biological systems.

摘要

通量组学是一个创新的“组学”研究领域,它测量生物系统中心代谢中所有细胞内通量的速率。通量组学从多个不同的“组学”领域收集数据,描绘分子相互作用的全貌。最近,通量组学已成为研究代谢表型最相关的方法之一。使用碳标记分子的代谢通量越来越多地用于监测代谢途径,实时探测相应的基因-RNA和蛋白质-代谢物相互作用网络。因此,通量组学揭示了多分子代谢途径的功能,并越来越多地应用于生物技术和药理学。在这里,我们描述了主要的通量组学方法和实验平台。此外,我们总结了不同生物系统中最近的通量组学研究结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a2a/8977530/4233cf5407c1/fphar-13-805782-g001.jpg

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