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与散发性肌萎缩侧索硬化相关的新型基因特征

Novel Genetic Signatures Associated With Sporadic Amyotrophic Lateral Sclerosis.

作者信息

Logan Robert, Dubel-Haag Juleah, Schcolnicov Nicolas, Miller Sean J

机构信息

Pluripotent Diagnostics Corp, Colorado Springs, CO, United States.

Department of Biology, Eastern Nazarene College, Quincy, MA, United States.

出版信息

Front Genet. 2022 Mar 24;13:851496. doi: 10.3389/fgene.2022.851496. eCollection 2022.

Abstract

Amyotrophic Lateral Sclerosis (ALS) is a complex polygenetic neurodegenerative disorder. Establishing a diagnosis for ALS is a challenging and lengthy process. By the time a diagnosis is made, the lifespan prognosis is only about two to 5 years. Genetic testing can be critical in assessing a patient's risk for ALS, provided they have one of the known familial genes. However, the vast majority of ALS cases are sporadic and have no known associated genetic signatures. Our analysis of the whole genome sequencing data from ALS patients and healthy controls from the Answer ALS Consortium has uncovered twenty-three novel mutations in twenty-two protein-coding genes associated with sporadic ALS cases. The results show the majority of patients with the sporadic form of ALS have at least one or more mutation(s) in the 22 genes we have identified with probabilities of developing ALS ranging from 25-99%, depending on the number of mutations a patient has among the identified genes. Moreover, we have identified a subset of the ALS cohort that has >17 mutations in the 22 identified. In this case, a patient with this mutation profile has a 99% chance of developing ALS and could be classified as being at high risk for the disease. These genetic biomarkers can be used as an early ALS disease diagnostic tool with a rapid and non-invasive technique.

摘要

肌萎缩侧索硬化症(ALS)是一种复杂的多基因神经退行性疾病。对ALS进行诊断是一个具有挑战性且漫长的过程。在做出诊断时,寿命预后仅约为两到五年。基因检测对于评估患者患ALS的风险可能至关重要,前提是他们拥有已知的家族性基因之一。然而,绝大多数ALS病例是散发性的,并且没有已知的相关基因特征。我们对来自“解答ALS联盟”的ALS患者和健康对照的全基因组测序数据进行的分析,在与散发性ALS病例相关的22个蛋白质编码基因中发现了23个新突变。结果表明,大多数散发性ALS患者在我们已确定的22个基因中至少有一个或多个突变,患ALS的概率在25%至99%之间,具体取决于患者在已确定基因中的突变数量。此外,我们在已确定的22个基因中发现了ALS队列中的一个子集,其有超过17个突变。在这种情况下,具有这种突变谱的患者患ALS的概率为99%,可被归类为该疾病的高风险患者。这些基因生物标志物可以用作一种采用快速且非侵入性技术的早期ALS疾病诊断工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bd6/8986983/f78582b8c5a7/fgene-13-851496-g001.jpg

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