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响应于……的条浒苔基因家族的全基因组鉴定及其作用

Genome-Wide Identification of Gene Family and Their Roles in Sarg in Response to .

作者信息

Li Peipei, Xu Yifan, Wang Ketao, Guo Wenlei, Gu Yujie, Lyu Shiheng, Huang Jianqin, Lin Haiping, Huang Chunying, Xu Zhen, Li Yan

机构信息

State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, China.

出版信息

Front Plant Sci. 2022 Apr 1;13:849043. doi: 10.3389/fpls.2022.849043. eCollection 2022.

Abstract

Hickory () is a critical tree species of the genus from the Juglandaceae family that contains nutrient-rich nuts. Due to large-scale soil degradation, the pests and diseases of hickory are becoming more and more serious. Thaumatin-like proteins (TLPs) are vital proteins involved in the complex defense process of plant pathogens. In this study, 40 genes were identified genome-widely and phylogenetically grouped into three subfamilies. The sequence of had a conservative pattern, such as eight stable disulfide bonds, REDDD, and G-X-[GF]-X-C-X-T-[GA]-D-C-X(1,2)-G-X-(2,3)-C structure. In total, 57 -elements related to stress-responsive, light-responsive, phytohormone-responsive, and plant-responsive were discovered. Under salicylate (SA), methyl jasmonate (MeJA), and ethephon (ETH) treatments, the expressions of , and had different patterns. This is an indication that most of the genes were upregulated by SA and downregulated by MeJA. Notably, seven genes were significantly upregulated under the inoculation, especially , with an over 20-fold change. Nine genes were shown by subcellular localization analysis to be located at the plasma membrane and cytoplasm. The knowledge of the disease-resistant function of the family in hickory is promoted by these results. A foundation reference for the molecular breeding of this plant in the future is provided by our findings.

摘要

山核桃()是胡桃科属的一种关键树种,其坚果营养丰富。由于大规模土壤退化,山核桃的病虫害日益严重。类甜蛋白(TLPs)是参与植物病原体复杂防御过程的重要蛋白质。在本研究中,全基因组鉴定了40个基因,并系统发育地分为三个亚家族。的序列具有保守模式,如八个稳定的二硫键、REDDD和G-X-[GF]-X-C-X-T-[GA]-D-C-X(1,2)-G-X-(2,3)-C结构。总共发现了57个与胁迫响应、光响应、植物激素响应和植物响应相关的元件。在水杨酸(SA)、茉莉酸甲酯(MeJA)和乙烯利(ETH)处理下,、和的表达模式不同。这表明大多数基因被SA上调,被MeJA下调。值得注意的是,在接种后,七个基因显著上调,尤其是,变化超过20倍。亚细胞定位分析表明九个基因位于质膜和细胞质中。这些结果促进了对山核桃家族抗病功能的认识。我们的研究结果为该植物未来的分子育种提供了基础参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d67e/9010463/8c0e8a82d05c/fpls-13-849043-g001.jpg

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