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结合质谱引导的基因组挖掘和虚拟筛选,研究W1次生代谢产物中的杀螨活性。

Combined mass spectrometry-guided genome mining and virtual screening for acaricidal activity in secondary metabolites of W1.

作者信息

Li Xingyu, Munir Shahzad, Xu Yan, Wang Yuehu, He Yueqiu

机构信息

College of Science, Yunnan Agricultural University Kunming 650201 China

Department of Chemistry, Cleveland State University Cleveland OH 44115 USA.

出版信息

RSC Adv. 2021 Jul 21;11(41):25441-25449. doi: 10.1039/d1ra01326b. eCollection 2021 Jul 19.

Abstract

A comprehensive analytic strategy was performed to study the acaricidal activity ingredients of W1, a strain for biological control of . Through genome mining, 14 biosynthetic gene clusters were identified, which encode secondary metabolites, and these were further confirmed by MALDI-TOF-MS or LC-ESI-MS/MS, including bacillomycin D C13-C17, macrolactin A, 7--malonyl-macrolactin A, surfactin C14, and surfactin C15. Moreover, 27 volatile compounds were identified by GC-MS, mainly including cyclodipeptides, alkanes, organic acids, and esters. Finally, 43 compounds identified from W1 were used in the virtual screening of acaricidal activity. The results showed that 16 compounds, including cyclodipeptides, bacillomycins, macrolactins, and surfactins, have acaricidal potential. This work provides a base for studying the mechanism of acaricidal action of W1 and a comprehensive strategy for the study of active ingredients from biocontrol strains.

摘要

采用综合分析策略研究用于生物防治的菌株W1的杀螨活性成分。通过基因组挖掘,鉴定出14个编码次生代谢产物的生物合成基因簇,并通过基质辅助激光解吸电离飞行时间质谱(MALDI-TOF-MS)或液相色谱-电喷雾串联质谱(LC-ESI-MS/MS)进一步确认,包括杆菌霉素D C13-C17、大环内酯A、7-丙二酰-大环内酯A、表面活性素C14和表面活性素C15。此外,通过气相色谱-质谱联用(GC-MS)鉴定出27种挥发性化合物,主要包括环二肽、烷烃、有机酸和酯类。最后,将从W1中鉴定出的43种化合物用于杀螨活性的虚拟筛选。结果表明,包括环二肽、杆菌霉素、大环内酯和表面活性素在内的16种化合物具有杀螨潜力。这项工作为研究W1的杀螨作用机制提供了基础,并为研究生物防治菌株中的活性成分提供了一种综合策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da57/9037071/1de01ac3cf69/d1ra01326b-f1.jpg

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