Wan Renping, Liao Hongliang, Liu Jingting, Zhou Lin, Yin Yingqiu, Mu Tianhao, Wei Jie
Department of Thoracic Surgery, Yuebei People's Hospital, 133 Huimin South Road, Wujiang District, Shaoguan City, Guangdong Province, China 440200.
Department of Respiratory Medicine, Yuebei People's Hospital, 133 Huimin South Road, Wujiang District, Shaoguan City Guangdong Province, China 440200.
Biomed Res Int. 2022 Apr 16;2022:4404406. doi: 10.1155/2022/4404406. eCollection 2022.
Cancer stem cells (CSCs) can induce recurrence and chemotherapy resistance of lung adenocarcinoma (LUAD). Reliable markers identified based on CSC characteristic of LUAD may improve patients' chemotherapy response and prognosis. OCLR was used to calculate mRNA expression-based stemness index (mRNAsi) of LUAD patients' data in TCGA. Association analysis of mRNAsi was performed with clinical features, somatic mutation, and tumor immunity. A prognostic prediction model was established with LASSO Cox regression. Kaplan-Meier Plotter (KM-plotter) and time-dependent ROC were applied to assess signature performance. For LUAD, univariate and multivariate Cox analysis was performed to identify independent prognostic factors. LUAD tissues showed a noticeably higher mRNAsi in than nontumor tissues, and it showed significant differences in T, N, M, AJCC stages, and smoking history. The most frequently mutated gene was TP53, with a higher mRNAsi relating to more frequent mutation of TP53. The mRNAsi was significantly negatively correlated with immune score, stromal score, and ESTIMATE score in LUAD. The blue module was associated with mRNAsi. The 5-gene signature was confirmed as an independent indicator of LUAD prognosis that could promote personalized treatment of LUAD and accurately predict overall survival (OS) of LUAD patients.
癌症干细胞(CSCs)可导致肺腺癌(LUAD)复发和化疗耐药。基于LUAD的CSC特征鉴定出的可靠标志物可能会改善患者的化疗反应和预后。利用OCLR计算了TCGA中LUAD患者数据基于mRNA表达的干性指数(mRNAsi)。对mRNAsi与临床特征、体细胞突变和肿瘤免疫进行了关联分析。采用LASSO Cox回归建立了预后预测模型。应用Kaplan-Meier Plotter(KM-plotter)和时间依赖的ROC评估特征性能。对于LUAD,进行单因素和多因素Cox分析以确定独立的预后因素。LUAD组织的mRNAsi明显高于非肿瘤组织,且在T、N、M、AJCC分期和吸烟史方面存在显著差异。最常发生突变的基因是TP53,mRNAsi越高,TP53的突变频率越高。在LUAD中,mRNAsi与免疫评分、基质评分和ESTIMATE评分显著负相关。蓝色模块与mRNAsi相关。5基因特征被确认为LUAD预后的独立指标,可促进LUAD的个性化治疗并准确预测LUAD患者的总生存期(OS)。