家庭环境中 SARS-CoV-2 变异株的二次感染率及其与疫苗接种状态的关系:一项更新的系统评价和荟萃分析。

Household Secondary Attack Rates of SARS-CoV-2 by Variant and Vaccination Status: An Updated Systematic Review and Meta-analysis.

机构信息

Department of Biostatistics, University of Florida, Gainesville.

Fred Hutchinson Cancer Research Center, Seattle, Washington.

出版信息

JAMA Netw Open. 2022 Apr 1;5(4):e229317. doi: 10.1001/jamanetworkopen.2022.9317.

Abstract

IMPORTANCE

An overall household secondary attack rate (SAR) of 18.9% (95% CI, 16.2%-22.0%) through June 17, 2021 was previously reported for SARS-CoV-2. Emerging variants of concern and increased vaccination have affected transmission rates.

OBJECTIVE

To evaluate how reported household SARs changed over time and whether SARs varied by viral variant and index case and contact vaccination status.

DATA SOURCES

PubMed and medRxiv from June 18, 2021, through March 8, 2022, and reference lists of eligible articles. Preprints were included.

STUDY SELECTION

Articles with original data reporting the number of infected and total number of household contacts. Search terms included SARS-CoV-2, COVID-19, variant, vaccination, secondary attack rate, secondary infection rate, household, index case, family contacts, close contacts, and family transmission.

DATA EXTRACTION AND SYNTHESIS

The Preferred Reporting Items for Systematic Reviews and Meta-Analyses reporting guideline was followed. Meta-analyses used generalized linear mixed models to obtain SAR estimates and 95% CIs.

MAIN OUTCOMES AND MEASURES

SAR stratified by covariates according to variant, index case and contact vaccination status, and index case identification period. SARs were used to estimate vaccine effectiveness on the basis of the transmission probability for susceptibility to infection (VES,p), infectiousness given infection (VEI,p), and total vaccine effectiveness (VET,p).

RESULTS

Household SARs were higher for 33 studies with midpoints in 2021 to 2022 (37.3%; 95% CI, 32.7% to 42.1%) compared with 63 studies with midpoints through April 2020 (15.5%; 95% CI, 13.2% to 18.2%). Household SARs were 42.7% (95% CI, 35.4% to 50.4%) for Omicron (7 studies), 36.4% (95% CI, 33.4% to 39.5%) for Alpha (11 studies), 29.7% (95% CI, 23.0% to 37.3%) for Delta (16 studies), and 22.5% (95% CI, 18.6% to 26.8%) for Beta (3 studies). For full vaccination, VES,p was 78.6% (95% CI, 76.0% to 80.9%) for Alpha, 56.4% (95% CI, 54.6% to 58.1%) for Delta, and 18.1% (95% CI, -18.3% to 43.3%) for Omicron; VEI,p was 75.3% (95% CI, 69.9% to 79.8%) for Alpha, 21.9% (95% CI, 11.0% to 31.5%) for Delta, and 18.2% (95% CI, 0.6% to 32.6%) for Omicron; and VET,p was 94.7% (95% CI, 93.3% to 95.8%) for Alpha, 64.4% (95% CI, 58.0% to 69.8%) for Delta, and 35.8% (95% CI, 13.0% to 52.6%) for Omicron.

CONCLUSIONS AND RELEVANCE

These results suggest that emerging SARS-CoV-2 variants of concern have increased transmissibility. Full vaccination was associated with reductions in susceptibility and infectiousness, but more so for Alpha than Delta and Omicron. The changes in estimated vaccine effectiveness underscore the challenges of developing effective vaccines concomitant with viral evolution.

摘要

重要性

先前报道的 SARS-CoV-2 家庭二次攻击率(SAR)在 2021 年 6 月 17 日前为 18.9%(95%CI,16.2%-22.0%)。关注的变异株的出现和疫苗接种率的增加影响了传播率。

目的

评估家庭 SAR 随时间的变化情况,以及 SAR 是否因病毒变异株、索引病例和接触者的疫苗接种状况而有所不同。

数据来源

从 2021 年 6 月 18 日至 2022 年 3 月 8 日,PubMed 和 medRxiv 以及合格文章的参考文献列表。包括预印本。

研究选择

具有报告感染人数和家庭接触者总数原始数据的文章。搜索词包括 SARS-CoV-2、COVID-19、变异株、疫苗接种、二次攻击率、二次感染率、家庭、索引病例、家庭接触者、密切接触者和家庭传播。

数据提取和综合

遵循系统评价和荟萃分析报告的首选报告项目。荟萃分析使用广义线性混合模型获得 SAR 估计值和 95%CI。

主要结果和措施

根据变异株、索引病例和接触者疫苗接种状况以及索引病例识别期,对 SAR 进行分层。根据易感性感染的传播概率(VES,p)、感染时的传染性(VEI,p)和总疫苗效力(VET,p),使用 SAR 估计疫苗效力。

结果

与 2020 年 4 月前的 63 项研究(15.5%;95%CI,13.2%至 18.2%)相比,2021 年至 2022 年中期有 33 项研究的家庭 SAR 更高(37.3%;95%CI,32.7%至 42.1%)。Omicron(7 项研究)的家庭 SAR 为 42.7%(95%CI,35.4%至 50.4%),Alpha(11 项研究)为 36.4%(95%CI,33.4%至 39.5%),Delta(16 项研究)为 29.7%(95%CI,23.0%至 37.3%),Beta(3 项研究)为 22.5%(95%CI,18.6%至 26.8%)。对于完全接种疫苗,Alpha 的 VES,p 为 78.6%(95%CI,76.0%至 80.9%),Delta 为 56.4%(95%CI,54.6%至 58.1%),Omicron 为 18.1%(95%CI,-18.3%至 43.3%);Delta 的 VEI,p 为 75.3%(95%CI,69.9%至 79.8%),21.9%(95%CI,11.0%至 31.5%),Omicron 为 18.2%(95%CI,0.6%至 32.6%);Omicron 的 VET,p 为 94.7%(95%CI,93.3%至 95.8%),Delta 为 64.4%(95%CI,58.0%至 69.8%),Omicron 为 35.8%(95%CI,13.0%至 52.6%)。

结论和相关性

这些结果表明,关注的 SARS-CoV-2 变异株的出现增加了传染性。完全接种疫苗与易感性和传染性降低有关,但 Alpha 比 Delta 和 Omicron 更为显著。估计疫苗效力的变化突显了在病毒不断演变的情况下开发有效疫苗的挑战。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67e8/9051991/6b32a829f903/jamanetwopen-e229317-g001.jpg

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